RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 TMEM140Q9NV12 185 aa5.11□□□□□ -1.59
SNAPC3-201ENST00000380799 SYBUQ9NX95 663 aa5.11□□□□□ -1.59
SNAPC3-201ENST00000380799 AFF4Q9UHB7 1163 aaKnown RBP5.11□□□□□ -1.59
SNAPC3-201ENST00000380799 AJAP1Q9UKB5 411 aaPredicted RBP5.11□□□□□ -1.59
SNAPC3-201ENST00000380799 MAGED2Q9UNF1 606 aaPredicted RBP5.11□□□□□ -1.59
SNAPC3-201ENST00000380799 LEFTY2O00292 366 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 ITGA10O75578 1167 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 GASTP01350 101 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 HDCP19113 662 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 EN2P19622 333 aaPredicted RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 FPR1P21462 350 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 DDX6P26196 483 aaKnown RBP eCLIP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 GUCY1A2P33402 732 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 CRHR1P34998 444 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 HSPA7P48741 367 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 RNASE9P60153 205 aaKnown RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 CTXN1P60606 82 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 MTM1Q13496 603 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 BLMHQ13867 455 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 MPEG1Q2M385 716 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 C3orf38Q5JPI3 329 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 DACT2Q5SW24 774 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 ABHD17BQ5VST6 288 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 ZKSCAN2Q63HK3 967 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 EFCAB12Q6NXP0 572 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 GGT6Q6P531 493 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 PDZD4Q76G19 769 aaPredicted RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 RD3Q7Z3Z2 195 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 XYLT1Q86Y38 959 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 TRMT2AQ8IZ69 625 aaKnown RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 ATP11CQ8NB49 1132 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 CPEB3Q8NE35 698 aaKnown RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 NTN5Q8WTR8 489 aaPredicted RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 LINC00476Q8WZB0 136 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 SLC9A6Q92581 669 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 TRIM63Q969Q1 353 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 P2RX7Q99572 595 aaKnown RBP5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 ISCA1Q9BUE6 129 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 GJB4Q9NTQ9 266 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 SAGE1Q9NXZ1 904 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 TERF2IPQ9NYB0 399 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 POGKQ9P215 609 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 COL20A1Q9P218 1284 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 CEP83Q9Y592 693 aa5.1□□□□□ -1.59
SNAPC3-201ENST00000380799 A0A1W2PPC4 97 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 PIPSLA2A3N6 862 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 WNT10BO00744 389 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 FFAR2O15552 330 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 THP07101 528 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 CDK4P11802 303 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 PTPN7P35236 360 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 FLT3LGP49771 235 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 ARFIP2P53365 341 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 SEC24CP53992 1094 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 SOX8P57073 446 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 HTRA4P83105 476 aaPredicted RBP5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 SLC35G1Q2M3R5 365 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 DCBLD1Q8N8Z6 715 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 ZFP28Q8NHY6 868 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 KBTBD7Q8WVZ9 684 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 TNPO1Q92973 898 aaKnown RBP5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 NMD3Q96D46 503 aaKnown RBP5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 BRIP1Q9BX63 1249 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 TRIM54Q9BYV2 358 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 DKK2Q9UBU2 259 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 RUVBL1Q9Y265 456 aaKnown RBP5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 GPR52Q9Y2T5 361 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 ACTL7AQ9Y615 435 aa5.09□□□□□ -1.59
SNAPC3-201ENST00000380799 SPATA31A6Q5VVP1 1343 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 TBKBP1A7MCY6 615 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 PLA2G6O60733 806 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 CSTBP04080 98 aaKnown RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 CD1AP06126 327 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 HSD3B1P14060 373 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 FGFR2P21802 821 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 EEF1GP26641 437 aaKnown RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 PIK3CGP48736 1102 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 CLK3P49761 638 aaKnown RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 ELLP55199 621 aaPredicted RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 RPS16P62249 146 aaKnown RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 EXOSC9Q06265 439 aaKnown RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 LMOD3Q0VAK6 560 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 PRAMEF14Q5SWL7 426 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 MMS22LQ6ZRQ5 1243 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 TXLNBQ8N3L3 684 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 TEX19Q8NA77 164 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 OR6B3Q8NGW1 331 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 CASKIN2Q8WXE0 1202 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 MAML1Q92585 1016 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 TFAP2CQ92754 450 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 ZNF566Q969W8 418 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 SLAMF7Q9NQ25 335 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 MYO1AQ9UBC5 1043 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 EPN1Q9Y6I3 576 aaPredicted RBP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 FPGT-TNNI3KV9GXZ4 949 aa5.08□□□□□ -1.6
SNAPC3-201ENST00000380799 BTN3A1O00481 513 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms