RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 STAT4Q14765 748 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 SGSM1Q2NKQ1 1148 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF614Q8N883 585 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 CCDC149Q6ZUS6 474 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 MRPS31Q92665 395 aaKnown RBP11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
PTCHD1-201ENST00000379361 DYNC1LI2O43237 492 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SGCGQ13326 291 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT31Q15323 416 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 IZUMO1Q8IYV9 350 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 RIN3Q8TB24 985 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 C20orf96Q9NUD7 363 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 EPHB3P54753 998 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 C11orf70Q9BRQ4 267 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 LXNQ9BS40 222 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TUFT1Q9NNX1 390 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 MKL2Q9ULH7 1088 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TSC22D4Q9Y3Q8 395 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 STX4Q12846 297 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TSNQ15631 228 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 KCNK16Q96T55 309 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SCN2AQ99250 2005 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 FLT1P17948 1338 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF157P51786 506 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TSPAN14Q8NG11 270 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 HSPA13P48723 471 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ITGADQ13349 1161 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 GNA13Q14344 377 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 FAM173BQ6P4H8 233 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TMEM154Q6P9G4 183 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 OSGEPL1Q9H4B0 414 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 GABBR1Q9UBS5 961 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TIPRLO75663 272 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 DNMT1P26358 1616 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 KLHL3Q9UH77 587 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 HACL1Q9UJ83 578 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 NAGPAQ9UK23 515 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 TDRD6O60522 2096 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ANXA9O76027 345 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SRP72O76094 671 aaKnown RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 IL6P05231 212 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 PRKCBP05771 671 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 POMGNT2Q8NAT1 580 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 RNFT2Q96EX2 444 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 MTMR6Q9Y217 621 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 MGAT4DA6NG13 374 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ETFBP38117 255 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 FCGRTP55899 365 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 COASYQ13057 564 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SCAIQ8N9R8 606 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 RNF149Q8NC42 400 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 GPR108Q9NPR9 543 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 AVENQ9NQS1 362 aaPredicted RBP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ATP10AO60312 1499 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 CHURC1-FNTBB4DL54 471 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 HS6ST1O60243 411 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 KDSRQ06136 332 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 ATP6V0D2Q8N8Y2 350 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 PCDHA10Q9Y5I2 948 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 CKBP12277 381 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 PHKG2P15735 406 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 LMBRD1Q9NUN5 540 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 PADI4Q9UM07 663 aa11.67□□□□□ -0.54
PTCHD1-201ENST00000379361 SMAPO00193 183 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT33AO76009 404 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 KDELC2Q7Z4H8 507 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 LRRC39Q96DD0 335 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 KLHL28Q9NXS3 571 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ADAM21Q9UKJ8 722 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 SHROOM3Q8TF72 1996 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 UTYO14607 1347 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 INSRP06213 1382 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 DLGAP3O95886 979 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 RCVRNP35243 200 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 PNPLA4P41247 253 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 GCLMP48507 274 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 TAB1Q15750 504 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 CCDC137Q6PK04 289 aaKnown RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 CASP10Q92851 521 aa11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 RNF25Q96BH1 459 aaPredicted RBP11.66□□□□□ -0.54
PTCHD1-201ENST00000379361 MAGEB10Q96LZ2 347 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms