RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 EFNA5P52803 228 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 TRPC3Q13507 836 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 MORF4L2Q15014 288 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 SGSM1Q2NKQ1 1148 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 NOL9Q5SY16 702 aaKnown RBP20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 LBX2Q6XYB7 198 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 PPP1R21Q6ZMI0 780 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 CEP128Q6ZU80 1094 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 FAM47EQ6ZV65 393 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 CDR2LQ86X02 465 aaPredicted RBP20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 ZBED8Q8IZ13 594 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 FITM2Q8N6M3 262 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 ARFGAP1Q8N6T3 406 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 PRCCQ92733 491 aaPredicted RBP20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 MAF1Q9H063 256 aa20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 DDX56Q9NY93 547 aaKnown RBP20.56■□□□□ 0.88
SHROOM1-202ENST00000378676 GOLGA8MH3BSY2 632 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 SGK1O00141 431 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 ARIH2O95376 493 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 IFNB1P01574 187 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 ITGAVP06756 1048 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 RFC1P35251 1148 aaPredicted RBP20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 MAP2K2P36507 400 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 OSTNP61366 133 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 SLC25A11Q02978 314 aaKnown RBP20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 MKRN3Q13064 507 aaKnown RBP20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 MTFR1Q15390 333 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 SH3D19Q5HYK7 790 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 SLC35B2Q8TB61 432 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 SPOCK2Q92563 424 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 TTC25Q96NG3 672 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 PAIP2Q9BPZ3 127 aaKnown RBP20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 ZNF518BQ9C0D4 1074 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 ZWILCHQ9H900 591 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 VPS37BQ9H9H4 285 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 PCDH9Q9HC56 1237 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 UTRNP46939 3433 aa20.55■□□□□ 0.88
SHROOM1-202ENST00000378676 ZBTB42B2RXF5 422 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 HGSO14964 777 aaPredicted RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 ASMTLO95671 621 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 EIF4BP23588 611 aaKnown RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 IL1R2P27930 398 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 GDF10P55107 478 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 PREPLQ4J6C6 727 aaPredicted RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 TDRPQ86YL5 185 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 THNSL1Q8IYQ7 743 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 SEPT1Q8WYJ6 367 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 MRRFQ96E11 262 aaKnown RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 ADAM33Q9BZ11 813 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 NOD2Q9HC29 1040 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 GRID1Q9ULK0 1009 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 CFAP73A6NFT4 308 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 GJB1P08034 283 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 PSMA2P25787 234 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 RDXP35241 583 aaKnown RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 PLCB3Q01970 1234 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 TAP1Q03518 808 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 BNIP1Q12981 228 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 PDIA2Q13087 525 aaKnown RBP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 ORC1Q13415 861 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 KCNT1Q5JUK3 1230 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 IER5Q5VY09 327 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 ANKMY2Q8IV38 441 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 C4orf33Q8N1A6 199 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 TRABDQ9H4I3 376 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 SHOC2Q9UQ13 582 aa20.54■□□□□ 0.88
SHROOM1-202ENST00000378676 B4GALT5O43286 388 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 LRCH4O75427 683 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 NQO1P15559 274 aaKnown RBP20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 OTUD4Q01804 1114 aaKnown RBP20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 NEDD9Q14511 834 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 ANKRD22Q5VYY1 191 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 EEF1DP3Q658K8 133 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 DLK2Q6UY11 383 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 PNMA8AQ86V59 439 aaPredicted RBP20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 ECHDC2Q86YB7 292 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 KIAA0319LQ8IZA0 1049 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 DENND1AQ8TEH3 1009 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 ZBTB10Q96DT7 871 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 NXF1Q9UBU9 619 aaKnown RBP20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 BAIAP2L1Q9UHR4 511 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 FARP1Q9Y4F1 1045 aaPredicted RBP20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 SNCAIPQ9Y6H5 919 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 SRCAPQ6ZRS2 3230 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 ALOX15BO15296 676 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 CD19P15391 556 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 GPX6P59796 221 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 IL9RQ01113 521 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 E2F5Q15329 346 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 MAPK6Q16659 721 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 METTL7BQ6UX53 244 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 ZBTB8OSQ8IWT0 167 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 ACTL9Q8TC94 416 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 TRAPPC12Q8WVT3 735 aa20.53■□□□□ 0.88
SHROOM1-202ENST00000378676 TACO1Q9BSH4 297 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms