RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ZFAND2BQ8WV99 257 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 ATG4CQ96DT6 458 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 CFAP57Q96MR6 1250 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 KIAA1586Q9HCI6 787 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 RNF146Q9NTX7 359 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 LRCH1Q9Y2L9 728 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 COL4A5P29400 1685 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 RGS20O76081 388 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 KCNA2P16389 499 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 CA4P22748 312 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 CLDN10P78369 228 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 CUL2Q13617 745 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 RCN2Q14257 317 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 PKN2Q16513 984 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 MTERF2Q49AM1 385 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 HHATQ5VTY9 493 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 OR52E8Q6IFG1 317 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 MTHFD1LQ6UB35 978 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 KATNAL2Q8IYT4 538 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 GLIS1Q8NBF1 620 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 SENP7Q9BQF6 1050 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 MRPL47Q9HD33 250 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 LNPEPQ9UIQ6 1025 aa17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 SMG5Q9UPR3 1016 aaKnown RBP17.48■□□□□ 0.39
PCDHA1-201ENST00000378133 PSME4Q14997 1843 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 VWA5AO00534 786 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 PSAPP07602 524 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 ZSCAN5DPP0CG00 497 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SKIP12755 728 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 KLRC2P26717 231 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 GCAP28676 217 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 POLE2P56282 527 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 PRKCEQ02156 737 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SPDYAQ5MJ70 313 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 HP1BP3Q5SSJ5 553 aaPredicted RBP17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 OTOAQ7RTW8 1153 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 MTMR14Q8NCE2 650 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 MIPEPQ99797 713 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 HAPLN2Q9GZV7 340 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 NPHS2Q9NP85 383 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SAR1AQ9NR31 198 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 ABHD2P08910 425 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 TCF4P15884 667 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 RPL7AP62424 266 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 RCN1Q15293 331 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SLC1A5Q15758 541 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 ZBTB41Q5SVQ8 909 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SCARA3Q6AZY7 606 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 EXD1Q8NHP7 514 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SCG3Q8WXD2 468 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 TMEM143Q96AN5 459 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 GPRASP2Q96D09 838 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 TRIM4Q9C037 500 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 FHDC1Q9C0D6 1143 aaPredicted RBP17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 SAYSD1Q9NPB0 183 aa17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-201ENST00000378133 KIAA1217Q5T5P2 1943 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 SIGLEC16A6NMB1 481 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 C2CD2LO14523 706 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 SLC18A1P54219 525 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 DSTYKQ6XUX3 929 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 CLNKQ7Z7G1 428 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 SGIP1Q9BQI5 828 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 CADM1Q9BY67 442 aaKnown RBP17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 DNPEPQ9ULA0 475 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 HNRNPCL1O60812 293 aaKnown RBP17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 RTP1P59025 263 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 NFX1Q12986 1120 aaKnown RBP17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 FYB2Q5VWT5 728 aa17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 ZNF75CPQ92670 426 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 MRRFQ96E11 262 aaKnown RBP17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 JPH1Q9HDC5 661 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-201ENST00000378133 CCDC22O60826 627 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ETS1P14921 441 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ACTR2P61160 394 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ENPEPQ07075 957 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 FEZF2Q8TBJ5 459 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 LBHD1Q9BQE6 289 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 CYLDQ9NQC7 956 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 PPP1R1BQ9UD71 204 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ZNF148Q9UQR1 794 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 NUB1Q9Y5A7 615 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 MAFGO15525 162 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 TGFB2P61812 414 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 SLC5A9Q2M3M2 681 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 CTC1Q2NKJ3 1217 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 TRIM72Q6ZMU5 477 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms