RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ATP6V1B1P15313 513 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 CENPCQ03188 943 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 NCOA4Q13772 614 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 KRT72Q14CN4 511 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 KIZQ2M2Z5 673 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 KIRREL3Q8IZU9 778 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 KCNB2Q92953 911 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 OLFML3Q9NRN5 406 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 ARHGEF38Q9NXL2 777 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 ZNF212Q9UDV6 495 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 V9GYQ6 96 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 TMED10P49755 219 aaKnown RBP12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 COG2Q14746 738 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 CRYMQ14894 314 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 TRIM60Q495X7 471 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 GLB1LQ6UWU2 654 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 L2HGDHQ9H9P8 463 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PCDHB12Q9Y5F1 795 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 KRT75O95678 551 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 GH1P01241 217 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 GTF2H3Q13889 308 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 FAM162AQ96A26 154 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 C17orf80Q9BSJ5 609 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 MTMR4Q9NYA4 1195 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PDGFRAP16234 1089 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 HMOX2P30519 316 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 ZNF235Q14590 738 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 EEF2KO00418 725 aaKnown RBP12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 AP5Z1O43299 807 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 WDR47O94967 919 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PYGLP06737 847 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 KLRC2P26717 231 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PPP3CCP48454 512 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PCSK7Q16549 785 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 C7orf61Q8IZ16 206 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PTPRN2Q92932 1015 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 E2F7Q96AV8 911 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 PDP2Q9P2J9 529 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
PCDHA9-201ENST00000378122 CDK17Q00537 523 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 IRAK1BP1Q5VVH5 260 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 HS6ST3Q8IZP7 471 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 MAN1C1Q9NR34 630 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 ENDOD1O94919 500 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 ITGA4P13612 1032 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 ACADSP16219 412 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 RAD51Q06609 339 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 TRADDQ15628 312 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 MROH9Q5TGP6 573 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 LAYNQ6UX15 382 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 RIBC1Q8N443 379 aaPredicted RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SLC25A41Q8N5S1 370 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 CSGALNACT1Q8TDX6 532 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 TIPINQ9BVW5 301 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 AVPR1AP37288 418 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SERPINB12Q96P63 405 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 C16orf96A6NNT2 1141 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 MYL4P12829 197 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 S100A5P33763 92 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 ABCE1P61221 599 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 RBM23Q86U06 439 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 VPS50Q96JG6 964 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 MIR1-1HGQ9H1L0 117 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SATB2Q9UPW6 733 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 ZBTB39O15060 712 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 HSPA1AP0DMV8 641 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 HSPA1BP0DMV9 641 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 GTF2H1P32780 548 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 PPIL6Q8IXY8 311 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SYN2Q92777 582 aaPredicted RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 EPAS1Q99814 870 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SHCBP1LQ9BZQ2 653 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 C3orf70A6NLC5 250 aaPredicted RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 CAND2O75155 1236 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 SNRPAP09012 282 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 PLEKHH3Q7Z736 793 aa12.48□□□□□ -0.41
PCDHA9-201ENST00000378122 TTC39CQ8N584 583 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms