RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 UBA3Q8TBC4 463 aa22.35■■□□□ 1.17
RNF38-205ENST00000377877 SLC35G2Q8TBE7 412 aa22.35■■□□□ 1.17
RNF38-205ENST00000377877 CTNNBL1Q8WYA6 563 aaPredicted RBP22.35■■□□□ 1.17
RNF38-205ENST00000377877 RSPH1Q8WYR4 309 aa22.35■■□□□ 1.17
RNF38-205ENST00000377877 TOP1MTQ969P6 601 aa22.35■■□□□ 1.17
RNF38-205ENST00000377877 OSGEPQ9NPF4 335 aa22.35■■□□□ 1.17
RNF38-205ENST00000377877 KIAA1257Q9ULG3 409 aa22.35■■□□□ 1.17
RNF38-205ENST00000377877 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.35■■□□□ 1.17
RNF38-205ENST00000377877 BTNL10A8MVZ5 291 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 MICAL2O94851 1124 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 NAP1L1P55209 391 aaKnown RBP22.34■■□□□ 1.17
RNF38-205ENST00000377877 GPC5P78333 572 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 ZNF771Q7L3S4 317 aaPredicted RBP22.34■■□□□ 1.17
RNF38-205ENST00000377877 BADQ92934 168 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 LTBP2Q14767 1821 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 ATP8B3O60423 1300 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 M0QZQ0 153 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 NRP1O14786 923 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 HOXA2O43364 376 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 MED7O43513 233 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 DGKIO75912 1065 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 FAM163BP0C2L3 166 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 FAM117BQ6P1L5 589 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 OTOP2Q7RTS6 562 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 RNF10Q8N5U6 811 aaKnown RBP22.34■■□□□ 1.17
RNF38-205ENST00000377877 IL23AQ9NPF7 189 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 MYO1AQ9UBC5 1043 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 COG5Q9UP83 839 aa22.34■■□□□ 1.17
RNF38-205ENST00000377877 LAMA2P24043 3122 aaKnown RBP22.34■■□□□ 1.17
RNF38-205ENST00000377877 ATP8B1O43520 1251 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 CDH5P33151 784 aaPredicted RBP22.33■■□□□ 1.17
RNF38-205ENST00000377877 PBX3P40426 434 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 NOP2P46087 812 aaKnown RBP22.33■■□□□ 1.17
RNF38-205ENST00000377877 NSFP46459 744 aaKnown RBP22.33■■□□□ 1.17
RNF38-205ENST00000377877 PSMC1P62191 440 aaKnown RBP22.33■■□□□ 1.17
RNF38-205ENST00000377877 PTP4A2Q12974 167 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 LCLAT1Q6UWP7 414 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 MON1BQ7L1V2 547 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 C7orf61Q8IZ16 206 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 GPR161Q8N6U8 529 aaKnown RBP22.33■■□□□ 1.17
RNF38-205ENST00000377877 SUSD3Q96L08 255 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 RTP3Q9BQQ7 232 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 LHX5Q9H2C1 402 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 DDX43Q9NXZ2 648 aaKnown RBP22.33■■□□□ 1.17
RNF38-205ENST00000377877 TSPAN16Q9UKR8 245 aa22.33■■□□□ 1.17
RNF38-205ENST00000377877 NT5C1B-RDH14C9J2C7 533 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 SLC11A1P49279 550 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 WDR5P61964 334 aaKnown RBP22.32■■□□□ 1.16
RNF38-205ENST00000377877 MMS22LQ6ZRQ5 1243 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 PHF13Q86YI8 300 aaPredicted RBP22.32■■□□□ 1.16
RNF38-205ENST00000377877 TMEM86AQ8N2M4 240 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 TMEM35BQ8NCS4 154 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 C11orf70Q9BRQ4 267 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 ZRANB2O95218 330 aaKnown RBP eCLIP22.32■■□□□ 1.16
RNF38-205ENST00000377877 ALDH2P05091 517 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 PFKMP08237 780 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 CCDC130P13994 396 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 GPD2P43304 727 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 EPHB4P54760 987 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 TERF2Q15554 542 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 ZNF653Q96CK0 615 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 NOX5Q96PH1 765 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 ADAM22Q9P0K1 906 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 TJP2Q9UDY2 1190 aa22.32■■□□□ 1.16
RNF38-205ENST00000377877 NCANO14594 1321 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 A0A0A6YYK5 440 aaPredicted RBP22.31■■□□□ 1.16
RNF38-205ENST00000377877 LSM8O95777 96 aaKnown RBP22.31■■□□□ 1.16
RNF38-205ENST00000377877 CYP1A2P05177 515 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 ODC1P11926 461 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 PTPN1P18031 435 aaKnown RBP22.31■■□□□ 1.16
RNF38-205ENST00000377877 RRM1P23921 792 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 LHX1P48742 406 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 GOLGA7BQ2TAP0 167 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 TTC30AQ86WT1 665 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 RFFLQ8WZ73 363 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 GOLPH3Q9H4A6 298 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 CNOT8Q9UFF9 292 aaKnown RBP22.31■■□□□ 1.16
RNF38-205ENST00000377877 PRKAG2Q9UGJ0 569 aa22.31■■□□□ 1.16
RNF38-205ENST00000377877 COL4A6Q14031 1691 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 TMEM189-UBE2V1I3L0A0 370 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 M0QYV0 167 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 TADA2AO75478 443 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 PALMO75781 387 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 CYP11A1P05108 521 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 GALTP07902 379 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 SYN1P17600 705 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 MMP8P22894 467 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 TUBB2AQ13885 445 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 PKDCCQ504Y2 493 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 ARHGAP17Q68EM7 881 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 ZNF365Q70YC5 407 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 B3GALNT2Q8NCR0 500 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 TPCN2Q8NHX9 752 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 GOLGA1Q92805 767 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 TUBB2BQ9BVA1 445 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 ZNF518BQ9C0D4 1074 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 CRTAC1Q9NQ79 661 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 RNF216Q9NWF9 866 aaPredicted RBP22.3■■□□□ 1.16
RNF38-205ENST00000377877 MARCH5Q9NX47 278 aa22.3■■□□□ 1.16
RNF38-205ENST00000377877 FAN1Q9Y2M0 1017 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms