RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PEX5P50542 639 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 CYP24A1Q07973 514 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 LMBRD2Q68DH5 695 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 MMTAG2Q9BU76 263 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 CYP3A4P08684 503 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 SPRP35270 261 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 CPA2P48052 419 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 STRIP1Q5VSL9 837 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 TMEM237Q96Q45 408 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF184Q99676 751 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 MARCOQ9UEW3 520 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 FBXO40Q9UH90 709 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 PAIP2BQ9ULR5 123 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 STAP1Q9ULZ2 295 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 GINS2Q9Y248 185 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 SKAP2O75563 359 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 HSPA1AP0DMV8 641 aaKnown RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 HSPA1BP0DMV9 641 aaKnown RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 GCNT1Q02742 428 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 EMC2Q15006 297 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 WLSQ5T9L3 541 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC117Q8IWD4 279 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 NDUFAF2Q8N183 169 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 FAM71DQ8N9W8 422 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 NUB1Q9Y5A7 615 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 SNX5Q9Y5X3 404 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 CSADQ9Y600 493 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 ZMYM2Q9UBW7 1377 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 BCL9LQ86UU0 1499 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 SRP72O76094 671 aaKnown RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 APRTP07741 180 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 RBP3P10745 1247 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 IL1R1P14778 569 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 COG2Q14746 738 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 PDK4Q16654 411 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 TKFCQ3LXA3 575 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 LRRC8EQ6NSJ5 796 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 GPAT2Q6NUI2 795 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 EXOC3L1Q86VI1 746 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 LRRC6Q86X45 466 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 BBS5Q8N3I7 341 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 LPAR1Q92633 364 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 CLMNQ96JQ2 1002 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 LRMDAQ9H2I8 198 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 PKD2L2Q9NZM6 624 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 SUN2Q9UH99 717 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 THRAP10827 490 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 VCAM1P19320 739 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 GSCP56915 257 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 PSMC6P62333 389 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 ROR2Q01974 943 aaKnown RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 LRRC36Q1X8D7 754 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 EFHC2Q5JST6 749 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 OLFML2BQ68BL8 750 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 DNAAF5Q86Y56 855 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 PRELID2Q8N945 189 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 SLC5A5Q92911 643 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 EME1Q96AY2 570 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC28BQ9BUN5 200 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 MRPL46Q9H2W6 279 aaKnown RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 DHX35Q9H5Z1 703 aaKnown RBP9.15□□□□□ -0.94
PCDH9-202ENST00000377865 KCNK4Q9NYG8 393 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 SPATA31A1Q5TZJ5 1347 aa9.15□□□□□ -0.94
PCDH9-202ENST00000377865 RNF103-CHMP3A0A140T963 221 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 BGNP21810 368 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 RRM1P23921 792 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 C7orf31Q8N865 590 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 LRRC57Q8N9N7 239 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 CCT7Q99832 543 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 KCNH7Q9NS40 1196 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 TRPC5Q9UL62 973 aaPredicted RBP9.15□□□□□ -0.95
PCDH9-202ENST00000377865 SORCS3Q9UPU3 1222 aa9.15□□□□□ -0.95
PCDH9-202ENST00000377865 MGEA5O60502 916 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 GRK2P25098 689 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 BNIP1Q12981 228 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 FLOT2Q14254 428 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PDK2Q15119 407 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CYTH1Q15438 398 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 UGP2Q16851 508 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PRUNE1Q86TP1 453 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 SLC9A9Q8IVB4 645 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 OR6B3Q8NGW1 331 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CXorf38Q8TB03 319 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 MED15Q96RN5 788 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CGRRF1Q99675 332 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 CBWD1Q9BRT8 395 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 ING2Q9H160 280 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 SEPT3Q9UH03 358 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 FCHO1O14526 889 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 NOL4O94818 638 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 PRKCBP05771 671 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 POLD1P28340 1107 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 KCTD2Q14681 263 aa9.14□□□□□ -0.95
PCDH9-202ENST00000377865 OPTNQ96CV9 577 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms