RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 FHDC1Q9C0D6 1143 aaPredicted RBP16.29■□□□□ 0.2
FXN-201ENST00000377270 PARVBQ9HBI1 364 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
FXN-201ENST00000377270 LOC105371267A0A1B0GV96 52 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 E9PBE3 544 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 CBFA2T3O75081 653 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 LMNAP02545 664 aaKnown RBP16.29■□□□□ 0.2
FXN-201ENST00000377270 HSPA1AP0DMV8 641 aaKnown RBP16.29■□□□□ 0.2
FXN-201ENST00000377270 HSPA1BP0DMV9 641 aaKnown RBP16.29■□□□□ 0.2
FXN-201ENST00000377270 FMO5P49326 533 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 LMNB2Q03252 620 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 ANKDD1AQ495B1 522 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 LRRC74BQ6ZQY2 392 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 DAW1Q8N136 415 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 BBS5Q8N3I7 341 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 DENND2DQ9H6A0 471 aaPredicted RBP16.29■□□□□ 0.2
FXN-201ENST00000377270 ZDHHC18Q9NUE0 388 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 KIAA1257Q9ULG3 409 aa16.29■□□□□ 0.2
FXN-201ENST00000377270 KIF13BQ9NQT8 1826 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 UBE4BO95155 1302 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 P4HBP07237 508 aaKnown RBP16.28■□□□□ 0.2
FXN-201ENST00000377270 VPS41P49754 854 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 ZNF132P52740 706 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 WASHC5Q12768 1159 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 MAPK7Q13164 816 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 AGAP9Q5VTM2 703 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 VPS36Q86VN1 386 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 AGGF1Q8N302 714 aaeCLIP16.28■□□□□ 0.26e-10■■■■■ 35.6
FXN-201ENST00000377270 SPERTQ8NA61 448 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 TRPC4APQ8TEL6 797 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 PRKAG3Q9UGI9 489 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
FXN-201ENST00000377270 RPTORQ8N122 1335 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 GOLGA8TH3BQL2 631 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 DHX15O43143 795 aaKnown RBP16.28■□□□□ 0.2
FXN-201ENST00000377270 EXOC3O60645 756 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 GTF2H1P32780 548 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 STAT1P42224 750 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 NEK3P51956 506 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 SLC29A2Q14542 456 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 ADRM1Q16186 407 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 PTPROQ16827 1216 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 TKFCQ3LXA3 575 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 NUP93Q8N1F7 819 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 CCDC113Q9H0I3 377 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 ZHX2Q9Y6X8 837 aa16.28■□□□□ 0.2
FXN-201ENST00000377270 RBBP6Q7Z6E9 1792 aaKnown RBP16.27■□□□□ 0.2
FXN-201ENST00000377270 NOTOA8MTQ0 251 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 EGFRP00533 1210 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 GRIA2P42262 883 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.2
FXN-201ENST00000377270 NR1D2Q14995 579 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 MYLK3Q32MK0 819 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 CBWD6Q4V339 395 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 CBWD3Q5JTY5 395 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 CBWD5Q5RIA9 395 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 TMTC4Q5T4D3 741 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 C1orf228Q6PIY5 440 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 KBTBD2Q8IY47 623 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 TMEM237Q96Q45 408 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 PRPF18Q99633 342 aaKnown RBP16.27■□□□□ 0.2
FXN-201ENST00000377270 LRMDAQ9H2I8 198 aa16.27■□□□□ 0.2
FXN-201ENST00000377270 AGO4Q9HCK5 861 aaKnown RBP16.27■□□□□ 0.2
FXN-201ENST00000377270 SMIM31A0A1B0GVY4 71 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 FAM47E-STBD1D6RA91 191 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 K7ENM7 598 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 MAP3K7O43318 606 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 EIF2AK2P19525 551 aaKnown RBP16.27■□□□□ 0.19
FXN-201ENST00000377270 PRKG1Q13976 671 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 TNFAIP8L3Q5GJ75 292 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 DUPD1Q68J44 220 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 ANO5Q75V66 913 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 TRMT1LQ7Z2T5 733 aaKnown RBP16.27■□□□□ 0.19
FXN-201ENST00000377270 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.19
FXN-201ENST00000377270 JDP2Q8WYK2 163 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 LPAR1Q92633 364 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 GFM2Q969S9 779 aaKnown RBP16.27■□□□□ 0.19
FXN-201ENST00000377270 ZNF184Q99676 751 aaPredicted RBP16.27■□□□□ 0.19
FXN-201ENST00000377270 SH2D3AQ9BRG2 576 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 ERP44Q9BS26 406 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 TMEM109Q9BVC6 243 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 TXLNGQ9NUQ3 528 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 DNAJC12Q9UKB3 198 aa16.27■□□□□ 0.19
FXN-201ENST00000377270 PFKPQ01813 784 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 MTMR1Q13613 665 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 LRRC14Q15048 493 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 KHDC1Q4VXA5 237 aaKnown RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 PCNX4Q63HM2 1172 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 NIPA1Q7RTP0 329 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 PEX26Q7Z412 305 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.191e-9■■■■■ 38.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms