RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 TRAPPC12Q8WVT3 735 aa18.08■□□□□ 0.48
TRIM27-201ENST00000377194 GPR20Q99678 358 aa18.08■□□□□ 0.48
TRIM27-201ENST00000377194 PLVAPQ9BX97 442 aa18.08■□□□□ 0.48
TRIM27-201ENST00000377194 ABLIM1O14639 778 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 TOM1L1O75674 476 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 RALAP11233 206 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 TBXAS1P24557 533 aaPredicted RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 IVDP26440 423 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 GBP1P32455 592 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 LAMB3Q13751 1172 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 CGB2Q6NT52 195 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 CDR2LQ86X02 465 aaPredicted RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 LMNTD2Q8IXW0 634 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 UBR7Q8N806 425 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 SLCO2A1Q92959 643 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 ACO2Q99798 780 aaKnown RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 RNPEPL1Q9HAU8 725 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 AAASQ9NRG9 546 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 DLGAP2Q9P1A6 1054 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 A0A0G2JLL6 359 aaPredicted RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 TLR3O15455 904 aaKnown RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 PEX11AO75192 247 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 TCF4P15884 667 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 CD58P19256 250 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 SSR1P43307 286 aaKnown RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 ZNF132P52740 706 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 POLE2P56282 527 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 SLC5A9Q2M3M2 681 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 ATP13A4Q4VNC1 1196 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 PRRT2Q7Z6L0 340 aaPredicted RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 ECHDC2Q86YB7 292 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 MRPL4Q9BYD3 311 aaKnown RBP18.07■□□□□ 0.48
TRIM27-201ENST00000377194 USTQ9Y2C2 406 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 A0A0G2JMZ2 1700 aa18.07■□□□□ 0.48
TRIM27-201ENST00000377194 TARSP26639 723 aaKnown RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 SESN3P58005 492 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 KLF1Q13351 362 aaPredicted RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 MPP2Q14168 576 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 TRIM72Q6ZMU5 477 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 FAM47EQ6ZV65 393 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 TTC8Q8TAM2 541 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 UCMAQ8WVF2 138 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 COPS5Q92905 334 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 DCLK3Q9C098 648 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 CDC42EP4Q9H3Q1 356 aaKnown RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 PRKAG3Q9UGI9 489 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 LRRC42Q9Y546 428 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 GJC1P36383 396 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 LIN9Q5TKA1 542 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 IER5Q5VY09 327 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 PHC3Q8NDX5 983 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 CKAP2Q8WWK9 683 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 RUNDC3BQ96NL0 473 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 NUDCD1Q96RS6 583 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 ROPN1BQ9BZX4 212 aaPredicted RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 ROPN1Q9HAT0 212 aaPredicted RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 RBPJLQ9UBG7 517 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 WEE2P0C1S8 567 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 CALB2P22676 271 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 EFNA5P52803 228 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 OSTNP61366 133 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 TBC1D25Q3MII6 688 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 RHPN2Q8IUC4 686 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 SULF1Q8IWU6 871 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 TMEM130Q8N3G9 435 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 VCPIP1Q96JH7 1222 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 TGS1Q96RS0 853 aaKnown RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 DNAJC17Q9NVM6 304 aaKnown RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 HAO1Q9UJM8 370 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 G3BP2Q9UN86 482 aaKnown RBP18.06■□□□□ 0.48
TRIM27-201ENST00000377194 SH3BP1Q9Y3L3 701 aa18.06■□□□□ 0.48
TRIM27-201ENST00000377194 PAPPA2Q9BXP8 1791 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 OTOFQ9HC10 1997 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 UNC5CO95185 931 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 PRKCBP05771 671 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 TPBGLP0DKB5 382 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 MMP8P22894 467 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 CHKAP35790 457 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 CELF3Q5SZQ8 465 aaKnown RBP18.05■□□□□ 0.48
TRIM27-201ENST00000377194 FBXO16Q8IX29 292 aaPredicted RBP18.05■□□□□ 0.48
TRIM27-201ENST00000377194 GALNT15Q8N3T1 639 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 DCPSQ96C86 337 aaKnown RBP18.05■□□□□ 0.48
TRIM27-201ENST00000377194 MRPL47Q9HD33 250 aaKnown RBP18.05■□□□□ 0.48
TRIM27-201ENST00000377194 ASIC3Q9UHC3 531 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 CPSF3Q9UKF6 684 aaKnown RBP18.05■□□□□ 0.48
TRIM27-201ENST00000377194 IGKV6-21A0A0C4DH24 114 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 B4GALT5O43286 388 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 ATP6V1C1P21283 382 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
TRIM27-201ENST00000377194 CALCOCO2Q13137 446 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 ZNF568Q3ZCX4 644 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 RHBDF2Q6PJF5 856 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 RHOT1Q8IXI2 618 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 THNSL1Q8IYQ7 743 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 PWWP2AQ96N64 755 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 EPAS1Q99814 870 aa18.05■□□□□ 0.48
TRIM27-201ENST00000377194 IMPG2Q9BZV3 1241 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms