RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 YBX2Q9Y2T7 364 aaKnown RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 TBC1D4O60343 1298 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 TAP1Q03518 808 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 FAM171BQ6P995 826 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 DCP1BQ8IZD4 617 aaKnown RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 C12orf29Q8N999 325 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 OR10T2Q8NGX3 314 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 SLC20A1Q8WUM9 679 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 RIN2Q8WYP3 895 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 B3GALT6Q96L58 329 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 MTRRQ9UBK8 725 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 ADAMTS1Q9UHI8 967 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 EPN1Q9Y6I3 576 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 SOWAHDA6NJG2 315 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 O00370 1275 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 ATP2C2O75185 946 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 MMEP08473 750 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 CHRNB2P17787 502 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 PBX2P40425 430 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 KIF11P52732 1056 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 PSMC1P62191 440 aaKnown RBP24.34■■□□□ 1.49
HLA-C-202ENST00000376237 FMO1Q01740 532 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 SLC18A3Q16572 532 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 KIAA0319Q5VV43 1072 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 TAF3Q5VWG9 929 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 LCLAT1Q6UWP7 414 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 CHRDL2Q6WN34 429 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 GLYCTKQ8IVS8 523 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 ZCWPW1Q9H0M4 648 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 KCNF1Q9H3M0 494 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 CRTAC1Q9NQ79 661 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.34■■□□□ 1.49
HLA-C-202ENST00000376237 MRPL17Q9NRX2 175 aaKnown RBP24.34■■□□□ 1.49
HLA-C-202ENST00000376237 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.34■■□□□ 1.49
HLA-C-202ENST00000376237 CEP83Q9Y592 693 aa24.34■■□□□ 1.49
HLA-C-202ENST00000376237 A0A1W2PPC1 479 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 CALCAP01258 141 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 CTSAP10619 480 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 SMAD3P84022 425 aaKnown RBP24.33■■□□□ 1.49
HLA-C-202ENST00000376237 CREMQ03060 361 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 SMARCB1Q12824 385 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 PSMD5Q16401 504 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 NFE2Q16621 373 aaPredicted RBP24.33■■□□□ 1.49
HLA-C-202ENST00000376237 PPP1R26Q5T8A7 1209 aaPredicted RBP24.33■■□□□ 1.49
HLA-C-202ENST00000376237 SLC30A5Q8TAD4 765 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 ZNF830Q96NB3 372 aaPredicted RBP24.33■■□□□ 1.49
HLA-C-202ENST00000376237 HNRNPABQ99729 332 aaKnown RBP24.33■■□□□ 1.49
HLA-C-202ENST00000376237 ZSWIM1Q9BR11 485 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 LHX5Q9H2C1 402 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 HESX1Q9UBX0 185 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 GTF3C4Q9UKN8 822 aa24.33■■□□□ 1.49
HLA-C-202ENST00000376237 TSC2P49815 1807 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 MYBPHLA2RUH7 354 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 DDX3XO00571 662 aaKnown RBP eCLIP24.32■■□□□ 1.483e-9■■□□□ 12.3
HLA-C-202ENST00000376237 ARHGEF15O94989 841 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 NDUFA10O95299 355 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 IPO7O95373 1038 aaKnown RBP24.32■■□□□ 1.48
HLA-C-202ENST00000376237 MDH1BQ5I0G3 518 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 SLC8B1Q6J4K2 584 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 PPP1R2P3Q6NXS1 205 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 RAD9BQ6WBX8 426 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 PKMYT1Q99640 499 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 ZNF518BQ9C0D4 1074 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 ZBP1Q9H171 429 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 SLC28A3Q9HAS3 691 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 FAM49BQ9NUQ9 324 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 SEPT11Q9NVA2 429 aaKnown RBP24.32■■□□□ 1.48
HLA-C-202ENST00000376237 TSPAN16Q9UKR8 245 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 KIAA1671Q9BY89 1806 aa24.32■■□□□ 1.48
HLA-C-202ENST00000376237 A0A087X0T9 212 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 EIF3CLB5ME19 914 aaKnown RBP24.31■■□□□ 1.48
HLA-C-202ENST00000376237 LSM8O95777 96 aaKnown RBP24.31■■□□□ 1.48
HLA-C-202ENST00000376237 FAM228BP0C875 321 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 GZMAP12544 262 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 PRSS55Q6UWB4 352 aaPredicted RBP24.31■■□□□ 1.48
HLA-C-202ENST00000376237 C4orf50Q6ZRC1 276 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 FBXO22Q8NEZ5 403 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 SPPL3Q8TCT6 385 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 PCED1BQ96HM7 432 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 EIF3CQ99613 913 aaKnown RBP24.31■■□□□ 1.48
HLA-C-202ENST00000376237 NKX2-4Q9H2Z4 354 aa24.31■■□□□ 1.48
HLA-C-202ENST00000376237 LCA5LO95447 670 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 SPA17Q15506 151 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 PPP2R2DQ66LE6 453 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 TMC7Q7Z402 723 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 FUKQ8N0W3 1084 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 ANKRD52Q8NB46 1076 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 TMEM35BQ8NCS4 154 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 SLC2A14Q8TDB8 520 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 ALG13Q9NP73 1137 aaKnown RBP24.3■■□□□ 1.48
HLA-C-202ENST00000376237 FNIP2Q9P278 1114 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 NAGPAQ9UK23 515 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 ATP8B3O60423 1300 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 C2CD2LO14523 706 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 MICAL2O94851 1124 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 CYP1A1P04798 512 aaPredicted RBP24.3■■□□□ 1.48
HLA-C-202ENST00000376237 CCDC130P13994 396 aa24.3■■□□□ 1.48
HLA-C-202ENST00000376237 CDH5P33151 784 aaPredicted RBP24.3■■□□□ 1.48
HLA-C-202ENST00000376237 SLC8A3P57103 927 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms