RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IWS1Q96ST2 819 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RIT2Q99578 217 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 KLF6Q99612 283 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 FOXP3Q9BZS1 431 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PAPOLBQ9NRJ5 636 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 KCNH7Q9NS40 1196 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PSMC3IPQ9P2W1 217 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 COQ4Q9Y3A0 265 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RLFQ13129 1914 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 AP1G2O75843 785 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 LMNAP02545 664 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 FESP07332 822 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 YWHABP31946 246 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 PIK3CAP42336 1068 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 LMNB2Q03252 620 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 RCN2Q14257 317 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 PLA2G4FQ68DD2 849 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 TDRPQ86YL5 185 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 TAB3Q8N5C8 712 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 DTX3LQ8TDB6 740 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 MCUR1Q96AQ8 359 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 CADM1Q9BY67 442 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 EXOC7Q9UPT5 735 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 ZNFX1Q9P2E3 1918 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 AHCYL1O43865 530 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 TYROBPO43914 113 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 HAUS5O94927 633 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 VHLP40337 213 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 PAPOLAP51003 745 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 NFX1Q12986 1120 aaKnown RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 EFTUD2Q15029 972 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 SNX30Q5VWJ9 437 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 PIDD1Q9HB75 910 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 GBA2Q9HCG7 927 aaPredicted RBP11.67□□□□□ -0.54
CCDC40-203ENST00000374877 ANKFY1Q9P2R3 1169 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 TBX20Q9UMR3 447 aa11.67□□□□□ -0.54
CCDC40-203ENST00000374877 DENND3A2RUS2 1198 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 TRAFD1O14545 582 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 TLR3O15455 904 aaKnown RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 LIASO43766 372 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 KRT36O76013 467 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 CFHP08603 1231 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 CENPUQ71F23 418 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 ZC3H18Q86VM9 953 aaKnown RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 VPS52Q8N1B4 723 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 ACSF2Q96CM8 615 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SLC10A4Q96EP9 437 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 TEX13BQ9BXU2 312 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 VCXQ9H320 206 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 HEY2Q9UBP5 337 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 ZNF214Q9UL59 606 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 PCDHB2Q9Y5E7 798 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 PTPRFP10586 1907 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 GYG2O15488 501 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 CCDC22O60826 627 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SNUPNO95149 360 aaKnown RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 KRT1P04264 644 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SP100P23497 879 aaPredicted RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 RNF220Q5VTB9 566 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 CPXCR1Q8N123 301 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 C2orf69Q8N8R5 385 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 EXD1Q8NHP7 514 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 ZNF333Q96JL9 665 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SAR1AQ9NR31 198 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 ARL8BQ9NVJ2 186 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 CPSF2Q9P2I0 782 aaKnown RBP11.66□□□□□ -0.54
CCDC40-203ENST00000374877 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SGK1O00141 431 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 CAPN9O14815 690 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 SLC18A1P54219 525 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 PTP4A2Q12974 167 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 GADL1Q6ZQY3 521 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 MON1BQ7L1V2 547 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 USP37Q86T82 979 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
CCDC40-203ENST00000374877 ZWINTO95229 277 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 TCF4P15884 667 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 SSTR1P30872 391 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 INHBEP58166 350 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 MAMLD1Q13495 774 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 UGCGQ16739 394 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 SPOPLQ6IQ16 392 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 MFSD7Q6UXD7 560 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 IL31RAQ8NI17 732 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 TCP10LQ8TDR4 215 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 SCG3Q8WXD2 468 aaKnown RBP11.65□□□□□ -0.54
CCDC40-203ENST00000374877 STMN2Q93045 179 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 FAM213AQ9BRX8 229 aa11.65□□□□□ -0.54
CCDC40-203ENST00000374877 BTBD10Q9BSF8 475 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms