RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 A0A1W2PPM1 405 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 FAM189A1O60320 539 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 PIGRP01833 764 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 MAN1A1P33908 653 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 RGS7P49802 495 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 TMEM62Q0P6H9 643 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 DNAJC3Q13217 504 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 PLCB4Q15147 1175 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 NPNTQ6UXI9 565 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 ARFGAP1Q8N6T3 406 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 TMEM134Q9H6X4 195 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 SLCO1B3Q9NPD5 702 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 CPSF3Q9UKF6 684 aaKnown RBP17.97■□□□□ 0.47
RXRB-201ENST00000374680 PHIPQ8WWQ0 1821 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 ZBTB42B2RXF5 422 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 SNX3O60493 162 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 CALB1P05937 261 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 GCLCP48506 637 aaPredicted RBP17.97■□□□□ 0.47
RXRB-201ENST00000374680 IER5Q5VY09 327 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 MFSD5Q6N075 450 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 CYB5D1Q6P9G0 228 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 RBM41Q96IZ5 413 aaKnown RBP17.97■□□□□ 0.47
RXRB-201ENST00000374680 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
RXRB-201ENST00000374680 TMEM109Q9BVC6 243 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 STK38LQ9Y2H1 464 aa17.97■□□□□ 0.47
RXRB-201ENST00000374680 A0A087WZ62 844 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 TCRBV7S3A2A0A539 114 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 FOXN2P32314 431 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 ASPAP45381 313 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 TFDP3Q5H9I0 405 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 SCYL2Q6P3W7 929 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 RIOX2Q8IUF8 465 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 FAM71DQ8N9W8 422 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 VCPIP1Q96JH7 1222 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 FDXACB1Q9BRP7 624 aaPredicted RBP17.96■□□□□ 0.47
RXRB-201ENST00000374680 RPF1Q9H9Y2 349 aaKnown RBP17.96■□□□□ 0.47
RXRB-201ENST00000374680 KCNG1Q9UIX4 513 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 AKT3Q9Y243 479 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 hCG_1818297A0A087WSY0 165 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 LACTBL1A8MY62 500 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 ZNF132P52740 706 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 ATP11AP98196 1134 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 BBS9Q3SYG4 887 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 ZNF667Q5HYK9 610 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 RFX6Q8HWS3 928 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 C12orf29Q8N999 325 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 KCTD6Q8NC69 237 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 XYLT2Q9H1B5 865 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 TPX2Q9ULW0 747 aaKnown RBP17.96■□□□□ 0.47
RXRB-201ENST00000374680 EVPLQ92817 2033 aa17.96■□□□□ 0.47
RXRB-201ENST00000374680 SRRM3A6NNA2 597 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 DNALI1O14645 258 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 CDH16O75309 829 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 CDKN2BP42772 138 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 EFNA5P52803 228 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 MCCD1P59942 119 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 MSS51Q4VC12 460 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 TNFAIP8L3Q5GJ75 292 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 JADE1Q6IE81 842 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 ZPBP2Q6X784 338 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 SULF1Q8IWU6 871 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 PIWIL1Q96J94 861 aaKnown RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 CDT1Q9H211 546 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 EFCC1Q9HA90 598 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 GPATCH2LQ9NWQ4 482 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 RLFQ13129 1914 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 M0QYV0 167 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 LRCH4O75427 683 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 ERBB2P04626 1255 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 CYP2C8P10632 490 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 BASP1P80723 227 aaKnown RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 C15orf59Q2T9L4 293 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 UNC45BQ8IWX7 931 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 C1orf127Q8N9H9 656 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 RMDN2Q96LZ7 410 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 LPIN3Q9BQK8 851 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 NSRP1Q9H0G5 558 aaKnown RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 CXCL16Q9H2A7 254 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.95■□□□□ 0.46
RXRB-201ENST00000374680 SSC5DA1L4H1 1573 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 F5H423 210 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 ASAP2O43150 1006 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 RASSF9O75901 435 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 WDR4P57081 412 aaKnown RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 KCNJ2P63252 427 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 TFDP1Q14186 410 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 KCTD2Q14681 263 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 MPZL3Q6UWV2 235 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 SYDE1Q6ZW31 735 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 CROCCP2Q86T23 111 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 ALLCQ8N6M5 410 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 RSAD2Q8WXG1 361 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 SIX4Q9UIU6 781 aa17.95■□□□□ 0.46
RXRB-201ENST00000374680 USP15Q9Y4E8 981 aaPredicted RBP17.95■□□□□ 0.46
RXRB-201ENST00000374680 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
RXRB-201ENST00000374680 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
RXRB-201ENST00000374680 SMAD1Q15797 465 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms