RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 SF3B1O75533 1304 aaKnown RBP eCLIP18.66■□□□□ 0.58
PFDN6-201ENST00000374606 M0QZQ0 153 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 GRM6O15303 877 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 FAM163BP0C2L3 166 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 SKILP12757 684 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 WARSP23381 471 aaKnown RBP18.65■□□□□ 0.58
PFDN6-201ENST00000374606 PRKCIP41743 596 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 ZNF132P52740 706 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 NDST1P52848 882 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 BPIFB4P59827 614 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 CCZ1BP86790 482 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 CCZ1P86791 482 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-201ENST00000374606 DLX2Q07687 328 aaPredicted RBP18.65■□□□□ 0.58
PFDN6-201ENST00000374606 ELAVL2Q12926 359 aaKnown RBP18.65■□□□□ 0.58
PFDN6-201ENST00000374606 ZNF394Q53GI3 561 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 WSCD1Q658N2 575 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 IRF2BP2Q7Z5L9 587 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 UNC93AQ86WB7 457 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 METTL23Q86XA0 190 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 TMTC1Q8IUR5 882 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 TMEM139Q8IV31 216 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 SPATA18Q8TC71 538 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 AAASQ9NRG9 546 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 HMGXB4Q9UGU5 601 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 PCDHB8Q9UN66 801 aa18.65■□□□□ 0.58
PFDN6-201ENST00000374606 A8MXQ7 604 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 NT5C1B-RDH14C9J2C7 533 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 TBX10O75333 385 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 LINC00271P0C7V0 271 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 TYMPP19971 482 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 CLCN1P35523 988 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 PTK2Q05397 1052 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 HGSNATQ68CP4 663 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 FUT10Q6P4F1 479 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 SLC47A2Q86VL8 602 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 COLGALT1Q8NBJ5 622 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 EPS8L1Q8TE68 723 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 WHAMMQ8TF30 809 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 EDAQ92838 391 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 NT5C1AQ9BXI3 368 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 KCNF1Q9H3M0 494 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 DEF6Q9H4E7 631 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 HAUS4Q9H6D7 363 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 ARHGAP20Q9P2F6 1191 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 CD207Q9UJ71 328 aa18.64■□□□□ 0.57
PFDN6-201ENST00000374606 SYN3O14994 580 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 CYP11A1P05108 521 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 PLEKP08567 350 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 PAEPP09466 180 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 CYP11B1P15538 503 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 GNA15P30679 374 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 PPM1AP35813 382 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 GNL1P36915 607 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 LHX1P48742 406 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 RAD23BP54727 409 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 PTPN5P54829 565 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 BMP8AQ7Z5Y6 402 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 VPS36Q86VN1 386 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 TMEM173Q86WV6 379 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 SLC39A11Q8N1S5 342 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 BCL7CQ8WUZ0 217 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 ZNF830Q96NB3 372 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 TWNKQ96RR1 684 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 CHP1Q99653 195 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 ELOVL4Q9GZR5 314 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 IGFLR1Q9H665 355 aa18.63■□□□□ 0.57
PFDN6-201ENST00000374606 PUF60Q9UHX1 559 aaKnown RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 TIMM13Q9Y5L4 95 aaPredicted RBP18.63■□□□□ 0.57
PFDN6-201ENST00000374606 C5orf42Q9H799 3197 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 SSU72P8A0A1W2PR75 194 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 SOWAHDA6NJG2 315 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 ARHGAP6O43182 974 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 CD19P15391 556 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 EIF4A3P38919 411 aaKnown RBP18.62■□□□□ 0.57
PFDN6-201ENST00000374606 ORC1Q13415 861 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.62■□□□□ 0.57
PFDN6-201ENST00000374606 NOP9Q86U38 636 aaKnown RBP18.62■□□□□ 0.57
PFDN6-201ENST00000374606 OSTM1Q86WC4 334 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 SLC4A11Q8NBS3 891 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 PRSS33Q8NF86 280 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 PPP2R3CQ969Q6 453 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 TMEM169Q96HH4 297 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 IGSF21Q96ID5 467 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 CCDC42Q96M95 316 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 NHEJ1Q9H9Q4 299 aaPredicted RBP18.62■□□□□ 0.57
PFDN6-201ENST00000374606 ACP6Q9NPH0 428 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 DDX43Q9NXZ2 648 aaKnown RBP18.62■□□□□ 0.57
PFDN6-201ENST00000374606 SPG21Q9NZD8 308 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 NOCTQ9UK39 431 aaKnown RBP18.62■□□□□ 0.57
PFDN6-201ENST00000374606 PCDHB12Q9Y5F1 795 aa18.62■□□□□ 0.57
PFDN6-201ENST00000374606 TRIOO75962 3097 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 VWA8A3KMH1 1905 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 GABRDO14764 452 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 THAP12O43422 761 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 AKR1B10O60218 316 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 CSPG5O95196 566 aa18.61■□□□□ 0.57
PFDN6-201ENST00000374606 ANXA13P27216 316 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms