RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ALDH1A1P00352 501 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ABHD2P08910 425 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ATF2P15336 505 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ZFXP17010 805 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ARF4P18085 180 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 NR1D1P20393 614 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 MARK3P27448 753 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 GJA5P36382 358 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 RGS2P41220 211 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 IRAK1P51617 712 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ZNF135P52742 658 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 PTPN5P54829 565 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 RNASE9P60153 205 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 DRP2Q13474 957 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 PDK2Q15119 407 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 SIX1Q15475 284 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 TAZQ16635 292 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 DNAJC21Q5F1R6 531 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 XKR4Q5GH76 650 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 CEP85LQ5SZL2 805 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ARHGAP17Q68EM7 881 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 MMS22LQ6ZRQ5 1243 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 BZW1Q7L1Q6 419 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ZBTB33Q86T24 672 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 RSPH3Q86UC2 560 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 TAX1BP1Q86VP1 789 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 KIAA0319LQ8IZA0 1049 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 LRRC71Q8N4P6 559 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 C1orf127Q8N9H9 656 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 TEKT4Q8WW24 435 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 HAUS1Q96CS2 278 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 MCRS1Q96EZ8 462 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 HHIPL1Q96JK4 782 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 FDXACB1Q9BRP7 624 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 DCLK3Q9C098 648 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 SYNCQ9H7C4 482 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 RSAD1Q9HA92 442 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 GDAP2Q9NXN4 497 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 DPP3Q9NY33 737 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 SENP1Q9P0U3 644 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 EBAG9O00559 213 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 DPYSL4O14531 572 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 FAM153BP0C7A2 387 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 DARSP14868 501 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 KCNE1P15382 129 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SMPD1P17405 629 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 TNFSF9P41273 254 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 CLCN3P51790 818 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 GUCY2FP51841 1108 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 CRYBB1P53674 252 aaPredicted RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SLC18A1P54219 525 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 RAD23BP54727 409 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 AIF1P55008 147 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 PLTPP55058 493 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SREBF2Q12772 1141 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 STAT4Q14765 748 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 MORF4L2Q15014 288 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 ZBTB6Q15916 424 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SLC10A6Q3KNW5 377 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 FAM153CQ494X1 144 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 ZC3H12AQ5D1E8 599 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 PPP1R21Q6ZMI0 780 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 ANKS1BQ7Z6G8 1248 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 YTHDF3Q7Z739 585 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 CCDC50Q8IVM0 306 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SLC4A11Q8NBS3 891 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 TSEN2Q8NCE0 465 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 CXorf38Q8TB03 319 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 TNIP3Q96KP6 325 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 HSFY1Q96LI6 401 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 KCNK17Q96T54 332 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 PLCD4Q9BRC7 762 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 CNPY3Q9BT09 278 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SEZ6LQ9BYH1 1024 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 GOLPH3Q9H4A6 298 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SPC25Q9HBM1 224 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SMARCAL1Q9NZC9 954 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 GRHL1Q9NZI5 618 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 FAM153AQ9UHL3 310 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 SHOC2Q9UQ13 582 aa9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 GNEQ9Y223 722 aaKnown RBP9.19□□□□□ -0.94
SNRNP40-202ENST00000373720 ESYT3A0FGR9 886 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 TMEM110-MUSTN1A8MSY1 372 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 GPR25O00155 361 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 PLXNB2O15031 1838 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SPAG6O75602 509 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 ITGB3P05106 788 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 KRT19P08727 400 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 CXCL8P10145 99 aa9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 HARSP12081 509 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-202ENST00000373720 SKIP12755 728 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms