RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 PABPC4LP0CB38 370 aaKnown RBP16.84■□□□□ 0.29
PBX3-204ENST00000373489 KITP10721 976 aa16.84■□□□□ 0.29
PBX3-204ENST00000373489 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
PBX3-204ENST00000373489 MED21Q13503 144 aa16.84■□□□□ 0.29
PBX3-204ENST00000373489 DBN1Q16643 649 aa16.84■□□□□ 0.29
PBX3-204ENST00000373489 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
PBX3-204ENST00000373489 HIPK4Q8NE63 616 aa16.84■□□□□ 0.29
PBX3-204ENST00000373489 LENG1Q96BZ8 264 aaPredicted RBP16.84■□□□□ 0.29
PBX3-204ENST00000373489 MTBPQ96DY7 904 aa16.84■□□□□ 0.29
PBX3-204ENST00000373489 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
PBX3-204ENST00000373489 MEI4A8MW99 385 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 KRT5P13647 590 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 RAP1GDS1P52306 607 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 GEMIN4P57678 1058 aaKnown RBP16.83■□□□□ 0.29
PBX3-204ENST00000373489 GPX6P59796 221 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 NFIAQ12857 509 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 ACAD10Q6JQN1 1059 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 TRMT1LQ7Z2T5 733 aaKnown RBP16.83■□□□□ 0.29
PBX3-204ENST00000373489 TMPRSS6Q8IU80 811 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 STKLD1Q8NE28 680 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 GSTCDQ8NEC7 633 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 OR6Y1Q8NGX8 325 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 SEMA4DQ92854 862 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 CCDC127Q96BQ5 260 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 VAV3Q9UKW4 847 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.29
PBX3-204ENST00000373489 SETSIPP0DME0 302 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 ATF7P17544 494 aaPredicted RBP16.83■□□□□ 0.28
PBX3-204ENST00000373489 DLG1Q12959 904 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 KRT72Q14CN4 511 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
PBX3-204ENST00000373489 C1orf220Q5T0J3 134 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 ZFPM1Q8IX07 1006 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 FAM84AQ96KN4 292 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 MIS12Q9H081 205 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 MARCOQ9UEW3 520 aaPredicted RBP16.83■□□□□ 0.28
PBX3-204ENST00000373489 BLOC1S6Q9UL45 172 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 DNAJC6O75061 913 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 SLITRK3O94933 977 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 MAGEA8P43361 318 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 MXI1P50539 228 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 ACTR3P61158 418 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 SYDE2Q5VT97 1194 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 APOBEC3HQ6NTF7 200 aaKnown RBP16.83■□□□□ 0.28
PBX3-204ENST00000373489 MBOAT7Q96N66 472 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 PAFAH2Q99487 392 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 SMYD3Q9H7B4 428 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 C10orf88Q9H8K7 445 aa16.83■□□□□ 0.28
PBX3-204ENST00000373489 ZNF395Q9H8N7 513 aaPredicted RBP16.83■□□□□ 0.28
PBX3-204ENST00000373489 ARHGAP42A6NI28 874 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 BUD23O43709 281 aaKnown RBP16.82■□□□□ 0.28
PBX3-204ENST00000373489 DESP17661 470 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
PBX3-204ENST00000373489 AQP4P55087 323 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 NET1Q7Z628 596 aaPredicted RBP16.82■□□□□ 0.28
PBX3-204ENST00000373489 USP6NLQ92738 828 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 IL1RAPL1Q9NZN1 696 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 F8W8V4 182 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 K7ENM7 598 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 LPXNO60711 386 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 MAGEC1O60732 1142 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 SLC1A1P43005 524 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 MAP3K10Q02779 954 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 TMED1Q13445 227 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 NFIL3Q16649 462 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 SHROOM1Q2M3G4 852 aaPredicted RBP16.82■□□□□ 0.28
PBX3-204ENST00000373489 ACAD11Q709F0 780 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 SMC1BQ8NDV3 1235 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 JDP2Q8WYK2 163 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 VPS11Q9H270 941 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 RABGEF1Q9UJ41 708 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 PCDHGA4Q9Y5G9 962 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
PBX3-204ENST00000373489 SLC26A4O43511 780 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 ALDH18A1P54886 795 aaKnown RBP16.81■□□□□ 0.28
PBX3-204ENST00000373489 ASPHQ12797 758 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 FAM182AQ5T1J6 154 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 C3orf62Q6ZUJ4 267 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 BANPQ8N9N5 519 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 PHF12Q96QT6 1004 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 SLC24A2Q9UI40 661 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 TBC1D30Q9Y2I9 924 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 QSER1Q2KHR3 1735 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 ALOX15BO15296 676 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 TM7SF2O76062 418 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 SORBS2O94875 1100 aaKnown RBP16.81■□□□□ 0.28
PBX3-204ENST00000373489 NCOA4Q13772 614 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 TRMT5Q32P41 509 aaKnown RBP16.81■□□□□ 0.28
PBX3-204ENST00000373489 RBM44Q6ZP01 1051 aaKnown RBP16.81■□□□□ 0.28
PBX3-204ENST00000373489 STXBP4Q6ZWJ1 553 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 CENPUQ71F23 418 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 PRPF39Q86UA1 669 aaKnown RBP16.81■□□□□ 0.28
PBX3-204ENST00000373489 PDSS2Q86YH6 399 aa16.81■□□□□ 0.28
PBX3-204ENST00000373489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms