RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 GOLGA6BA6NDN3 693 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 NOP2P46087 812 aaKnown RBP21.83■■□□□ 1.09
SYNC-201ENST00000373484 GLUD2P49448 558 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 DSG1Q02413 1049 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 DUOXA2Q1HG44 320 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 FAM171A1Q5VUB5 890 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 ADGRD2Q7Z7M1 963 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 CREG2Q8IUH2 290 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 MRPL43Q8N983 215 aaKnown RBP21.83■■□□□ 1.09
SYNC-201ENST00000373484 CXorf38Q8TB03 319 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 TMC2Q8TDI7 906 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 AUTS2Q8WXX7 1259 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 ITGA11Q9UKX5 1188 aa21.83■■□□□ 1.09
SYNC-201ENST00000373484 C2orf71A6NGG8 1288 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 HIDE1A8MVS5 230 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 AGPSO00116 658 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 PJA2O43164 708 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 PHACTR2O75167 634 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 CXCL14O95715 111 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 ITGB3P05106 788 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 URODP06132 367 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 TCEAL5Q5H9L2 206 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 MIIPQ5JXC2 388 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 KIAA0319Q5VV43 1072 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 INTS8Q75QN2 995 aaKnown RBP21.83■■□□□ 1.08
SYNC-201ENST00000373484 SUSD3Q96L08 255 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 B3GALT6Q96L58 329 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 ALS2CR12Q96Q35 445 aa21.83■■□□□ 1.08
SYNC-201ENST00000373484 A0A087WUV0 522 aaPredicted RBP21.82■■□□□ 1.08
SYNC-201ENST00000373484 I3L4J1 428 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 LILRB3O75022 631 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 TNNC2P02585 160 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 GGCXP38435 758 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 LILRA4P59901 499 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 APBA1Q02410 837 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 ENPEPQ07075 957 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 TTC31Q49AM3 519 aaPredicted RBP21.82■■□□□ 1.08
SYNC-201ENST00000373484 RTP2Q5QGT7 225 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 GPR65Q8IYL9 337 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 MAFAQ8NHW3 353 aaPredicted RBP21.82■■□□□ 1.08
SYNC-201ENST00000373484 ZNF516Q92618 1163 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 CAVIN3Q969G5 261 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 PPP2R3CQ969Q6 453 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 BORCS6Q96GS4 357 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 MRPL17Q9NRX2 175 aaKnown RBP21.82■■□□□ 1.08
SYNC-201ENST00000373484 SIX4Q9UIU6 781 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 SSX2IPQ9Y2D8 614 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 HYOU1Q9Y4L1 999 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 PRUNE2Q8WUY3 3088 aa21.82■■□□□ 1.08
SYNC-201ENST00000373484 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 GOLGA6CA6NDK9 693 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 RCCD1A6NED2 376 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 PDE2AO00408 941 aaPredicted RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 PES1O00541 588 aaKnown RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 SLC16A3O15427 465 aaKnown RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 GOLGA6DP0CG33 693 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 FGFR3P22607 806 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 PAX3P23760 479 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 POLR2BP30876 1174 aaKnown RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 MTIF2P46199 727 aaKnown RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 MCCD1P59942 119 aaPredicted RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 DLG4P78352 724 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 BFSP1Q12934 665 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 CCDC85BQ15834 202 aaPredicted RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 KIAA1841Q6NSI8 718 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 RNF10Q8N5U6 811 aaKnown RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 CEP63Q96MT8 703 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 TTPALQ9BTX7 342 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 GOLGA6AQ9NYA3 693 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 ATXN2Q99700 1313 aaKnown RBP21.81■■□□□ 1.08
SYNC-201ENST00000373484 PLXNA3P51805 1871 aa21.81■■□□□ 1.08
SYNC-201ENST00000373484 SRGAP2O75044 1071 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 KRT13P13646 458 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 VAMP7P51809 220 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 AP3M2P53677 418 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 C1orf220Q5T0J3 134 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 SCARA3Q6AZY7 606 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 USP37Q86T82 979 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 ZNF560Q96MR9 790 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 AGAP1Q9UPQ3 857 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 M0QZQ0 153 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 C2CD2LO14523 706 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 SYN3O14994 580 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 TKTP29401 623 aaKnown RBP21.8■■□□□ 1.08
SYNC-201ENST00000373484 CA8P35219 290 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 TAF6P49848 677 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 CEP57Q86XR8 500 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 LRRC52Q8N7C0 313 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 C1orf131Q8NDD1 294 aaKnown RBP21.8■■□□□ 1.08
SYNC-201ENST00000373484 RIN2Q8WYP3 895 aaPredicted RBP21.8■■□□□ 1.08
SYNC-201ENST00000373484 CAPZA3Q96KX2 299 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 NUCKS1Q9H1E3 243 aaKnown RBP21.8■■□□□ 1.08
SYNC-201ENST00000373484 TLE6Q9H808 572 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 PCDHA13Q9Y5I0 950 aa21.8■■□□□ 1.08
SYNC-201ENST00000373484 MTCL1Q9Y4B5 1905 aaKnown RBP21.79■■□□□ 1.08
SYNC-201ENST00000373484 SPTLC1O15269 473 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 KRT19P08727 400 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 PNPLA4P41247 253 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 RBP5P82980 135 aa21.79■■□□□ 1.08
SYNC-201ENST00000373484 SKOR1P84550 965 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms