RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CSH1P0DML2 217 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 CSH2P0DML3 217 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 GJB2P29033 226 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 ADSSP30520 456 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 PXNP49023 591 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 GALK1P51570 392 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 ZNF268Q14587 947 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 KARSQ15046 597 aaKnown RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 PDGFRLQ15198 375 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 RABEP1Q15276 862 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 NFE2Q16621 373 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 SV2CQ496J9 727 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 AASDHQ4L235 1098 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 PLA2G2CQ5R387 149 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 TXNDC8Q6A555 127 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 KBTBD6Q86V97 674 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 EFCAB13Q8IY85 973 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 C12orf50Q8NA57 414 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 MRPS31Q92665 395 aaKnown RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 TMX3Q96JJ7 454 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 FBRSL1Q9HCM7 1045 aaKnown RBP14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 TMLHEQ9NVH6 421 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 PCDHGA5Q9Y5G8 931 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 CHD6Q8TD26 2715 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 SCN1AP35498 2009 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 PRPF40AO75400 957 aaKnown RBP14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 EGFP01133 1207 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 CCDC192P0DO97 292 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 DRD1P21728 446 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 PNPLA4P41247 253 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 TSPY1Q01534 308 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 GRIN1Q05586 938 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 SF3A2Q15428 464 aaKnown RBP14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 ST3GAL2Q16842 350 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 FBXO43Q4G163 708 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 CC2D1AQ6P1N0 951 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 KRI1Q8N9T8 703 aaKnown RBP14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 LEO1Q8WVC0 666 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 POMGNT1Q8WZA1 660 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 LARP4BQ92615 738 aaKnown RBP14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 EXOC4Q96A65 974 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 HVCN1Q96D96 273 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 ACBD6Q9BR61 282 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 PI4K2AQ9BTU6 479 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 ABCB6Q9NP58 842 aa14.09□□□□□ -0.15
TRAPPC3-201ENST00000373159 RALGAPA1Q6GYQ0 2036 aa14.08□□□□□ -0.15
TRAPPC3-201ENST00000373159 RNF40O75150 1001 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 PPP1R37O75864 691 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 NOL4O94818 638 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 ARSAP15289 507 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 GJA4P35212 333 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 RPL10AP62906 217 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 N4BP2L1Q5TBK1 243 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 TMEM86AQ8N2M4 240 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 PDCL2Q8N4E4 241 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 RASSF8Q8NHQ8 419 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 RIN3Q8TB24 985 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 TRMT2BQ96GJ1 504 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 MYRFLQ96LU7 910 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 ZNF560Q96MR9 790 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 P2RY13Q9BPV8 354 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 IKZF4Q9H2S9 585 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 RXFP3Q9NSD7 469 aa14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 UXTQ9UBK9 157 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 MAGED2Q9UNF1 606 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 NUP210Q8TEM1 1887 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-201ENST00000373159 SPAG17Q6Q759 2223 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 PMLP29590 882 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 GPR15P49685 360 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 FAM160A1Q05DH4 1040 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 SF3A1Q15459 793 aaKnown RBP14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 CCDC6Q16204 474 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 DDR2Q16832 855 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 PLK5Q496M5 336 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 STPG1Q5TH74 334 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 LARP1BQ659C4 914 aaKnown RBP14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 SYT13Q7L8C5 426 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 SPATA18Q8TC71 538 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 ECT2Q9H8V3 914 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 VPS45Q9NRW7 570 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 POLR3BQ9NW08 1133 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 SEL1LQ9UBV2 794 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 ANGPTL2Q9UKU9 493 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 L1RE1Q9UN81 338 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 EXOC7Q9UPT5 735 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 CACNA1GO43497 2377 aa14.07□□□□□ -0.16
TRAPPC3-201ENST00000373159 HUS1O60921 280 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 LDHAP00338 332 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 CYP2F1P24903 491 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 SHC2P98077 582 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 TFAMQ00059 246 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 MYL7Q01449 175 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms