RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 SCARA5Q6ZMJ2 495 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 PLPPR4Q7Z2D5 763 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 FAM228AQ86W67 206 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 ARFGAP1Q8N6T3 406 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 MLXIPLQ9NP71 852 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 NKIRAS1Q9NYS0 192 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 CYTH4Q9UIA0 394 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 ARL2BPQ9Y2Y0 163 aa13.23□□□□□ -0.29
TSPAN6-201ENST00000373020 POLR2AP24928 1970 aaKnown RBP13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 SIGLEC16A6NMB1 481 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 LRCH4O75427 683 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 UBOX5O94941 541 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 TAC1P20366 129 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 STX2P32856 288 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 WDR4P57081 412 aaKnown RBP13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 NCALDP61601 193 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 TFAMQ00059 246 aaKnown RBP13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 MTFR1Q15390 333 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 BBS12Q6ZW61 710 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 TRIM50Q86XT4 487 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 GDAP1Q8TB36 358 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 DENND1AQ8TEH3 1009 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 ACSF2Q96CM8 615 aaPredicted RBP13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 SENP1Q9P0U3 644 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
TSPAN6-201ENST00000373020 IRF6O14896 467 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 MAGEB2O15479 319 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CNMDO75829 334 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 ASMTLO95671 621 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 TNNC2P02585 160 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 RFC1P35251 1148 aaPredicted RBP13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 SF3A3Q12874 501 aaKnown RBP eCLIP13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CELF3Q5SZQ8 465 aaKnown RBP13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 EEF1DP3Q658K8 133 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 RGS9BPQ6ZS82 235 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CCDC63Q8NA47 563 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 JOSD2Q8TAC2 188 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 ANKRD36BP1Q96IX9 119 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 IL18RAPO95256 599 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 KRT7P08729 469 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 PSMA2P25787 234 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 MARK3P27448 753 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 IL1R2P27930 398 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 FOXN2P32314 431 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 BNIP1Q12981 228 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 HSDL1Q3SXM5 330 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 RNF43Q68DV7 783 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CENPUQ71F23 418 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 NCAPG2Q86XI2 1143 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CEP120Q8N960 986 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 HAUS1Q96CS2 278 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CDT1Q9H211 546 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 CD248Q9HCU0 757 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 TJP2Q9UDY2 1190 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 FETUBQ9UGM5 382 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 SLC24A2Q9UI40 661 aa13.21□□□□□ -0.29
TSPAN6-201ENST00000373020 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.3
TSPAN6-201ENST00000373020 B4GALT5O43286 388 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 MED7O43513 233 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 KRT3P12035 628 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 RAD23BP54727 409 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 LACTBP83111 547 aaPredicted RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 IL9RQ01113 521 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 MBTD1Q05BQ5 628 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 FAM133BQ5BKY9 247 aaKnown RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 XYLT1Q86Y38 959 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 RXFP1Q9HBX9 757 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 SMG5Q9UPR3 1016 aaKnown RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 TNFSF13BQ9Y275 285 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 E7ESA3 106 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 SGK1O00141 431 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 SLC26A2P50443 739 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 RIPK1Q13546 671 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 PRKG1Q13976 671 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 TFDP1Q14186 410 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
TSPAN6-201ENST00000373020 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms