RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 HPS1Q92902 700 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 BORCS5Q969J3 196 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 PAFAH2Q99487 392 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 COPS7BQ9H9Q2 264 aaPredicted RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 S100A14Q9HCY8 104 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 CHST7Q9NS84 486 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 TELO2Q9Y4R8 837 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 FADS3Q9Y5Q0 445 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 FOXN3O00409 490 aaPredicted RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 GM2AP17900 193 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 VCPP55072 806 aaKnown RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 PLOD1Q02809 727 aaPredicted RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 TRAF2Q12933 501 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 CCDC14Q49A88 953 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 PERM1Q5SV97 790 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 PRUNE1Q86TP1 453 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 NUP93Q8N1F7 819 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 CDKL2Q92772 493 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 GATA6Q92908 595 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 UTP4Q969X6 686 aaKnown RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 BORCS6Q96GS4 357 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 MMTAG2Q9BU76 263 aaKnown RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 PRDM16Q9HAZ2 1276 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 SLC24A2Q9UI40 661 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 PACSIN3Q9UKS6 424 aa11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 RGPD8O14715 1765 aaPredicted RBP11.73□□□□□ -0.53
SYNPO2L-201ENST00000372873 TAF4O00268 1085 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 AKAP10O43572 662 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 RNASEH1O60930 286 aaKnown RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 TM7SF2O76062 418 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 LDHBP07195 334 aaKnown RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 MRPS22P82650 360 aaKnown RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 AAGABQ6PD74 315 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 IRF2BP2Q7Z5L9 587 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 PHC3Q8NDX5 983 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 CYGBQ8WWM9 190 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 SLC7A6OSQ96CW6 309 aaPredicted RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 WRNIP1Q96S55 665 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 ADAM7Q9H2U9 754 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 UVRAGQ9P2Y5 699 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 TUBGCP4Q9UGJ1 667 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 FIS1Q9Y3D6 152 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 MYBP10242 640 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 RFC4P35249 363 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 FDFT1P37268 417 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 SLC5A3P53794 718 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 OXCT1P55809 520 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 DLG1Q12959 904 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 GIT2Q14161 759 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 RAPH1Q70E73 1250 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 GRHL1Q9NZI5 618 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 AURKCQ9UQB9 309 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 A0A1W2PPM1 405 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 TRIM64CA6NLI5 447 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 TRIM49D1C9J1S8 452 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 AP3B1O00203 1094 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 MGEA5O60502 916 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 BCL10O95999 233 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 PORP16435 677 aaPredicted RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 IL6STP40189 918 aaPredicted RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 CASP4P49662 377 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 ZNF618Q5T7W0 954 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 AMIGO2Q86SJ2 522 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 RFX6Q8HWS3 928 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 C11orf70Q9BRQ4 267 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 OSBPL6Q9BZF3 934 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 VPS11Q9H270 941 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 PARVGQ9HBI0 331 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 LRRC4CQ9HCJ2 640 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 SNX13Q9Y5W8 968 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 AKAP12Q02952 1782 aa11.72□□□□□ -0.53
SYNPO2L-201ENST00000372873 HTR3EA5X5Y0 456 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 NEMP1O14524 444 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 WEE2P0C1S8 567 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 GAP43P17677 238 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 TNNI1P19237 187 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 GSTO1P78417 241 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 KRT76Q01546 638 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 ANO4Q32M45 955 aa11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 FASTKD5Q7L8L6 764 aaKnown RBP11.71□□□□□ -0.53
SYNPO2L-201ENST00000372873 TTC7BQ86TV6 843 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms