RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 PLA2G4AP47712 749 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 SLC11A1P49279 550 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 BCAR1P56945 870 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 TAP1Q03518 808 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
C9orf78-201ENST00000372447 ARHGEF26Q96DR7 871 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 PBKQ96KB5 322 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 RBM12Q9NTZ6 932 aaKnown RBP17.06■□□□□ 0.32
C9orf78-201ENST00000372447 DPP3Q9NY33 737 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 GBF1Q92538 1859 aa17.06■□□□□ 0.32
C9orf78-201ENST00000372447 NT5C1B-RDH14C9J2C7 533 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 MAP2K7O14733 419 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 NRP1O14786 923 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 XPOTO43592 962 aaKnown RBP17.05■□□□□ 0.32
C9orf78-201ENST00000372447 RTN2O75298 545 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 GZMAP12544 262 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 IGFBP6P24592 240 aaPredicted RBP17.05■□□□□ 0.32
C9orf78-201ENST00000372447 OR1G1P47890 313 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
C9orf78-201ENST00000372447 PDE6CP51160 858 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 CLCNKBP51801 687 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 DUOXA2Q1HG44 320 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 WDR44Q5JSH3 913 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 TAF3Q5VWG9 929 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 KCNT2Q6UVM3 1135 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 HDXQ7Z353 690 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 NT5DC3Q86UY8 548 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 RHOT2Q8IXI1 618 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 C1orf127Q8N9H9 656 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 RUBCNQ92622 972 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 ELMO3Q96BJ8 720 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 C17orf80Q9BSJ5 609 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 LRRC1Q9BTT6 524 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 SLC28A3Q9HAS3 691 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 CHD9Q3L8U1 2897 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 TDRD15B5MCY1 1934 aaKnown RBP17.05■□□□□ 0.32
C9orf78-201ENST00000372447 RALGAPA2Q2PPJ7 1873 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 F8W810 466 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 BUB1BO60566 1050 aaPredicted RBP17.05■□□□□ 0.32
C9orf78-201ENST00000372447 HLA-DRAP01903 254 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 MMEP08473 750 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 TMEM191BP0C7N4 346 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 LAG3P18627 525 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 PIK3CAP42336 1068 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 FMO1Q01740 532 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 BIRC3Q13489 604 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 UPP1Q16831 310 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 MAP9Q49MG5 647 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 COLGALT1Q8NBJ5 622 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 CXorf38Q8TB03 319 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 TIFAQ96CG3 184 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 ANKRD36BP1Q96IX9 119 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 CALR3Q96L12 384 aaKnown RBP17.05■□□□□ 0.32
C9orf78-201ENST00000372447 TMEM175Q9BSA9 504 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 SELENOOQ9BVL4 669 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 ACP6Q9NPH0 428 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 AMFRQ9UKV5 643 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 FAN1Q9Y2M0 1017 aa17.05■□□□□ 0.32
C9orf78-201ENST00000372447 CHD7Q9P2D1 2997 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 SOX1O00570 391 aaPredicted RBP17.04■□□□□ 0.32
C9orf78-201ENST00000372447 TNNC2P02585 160 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 LRPAP1P30533 357 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 BMPR1AP36894 532 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 HADHBP55084 474 aaKnown RBP17.04■□□□□ 0.32
C9orf78-201ENST00000372447 GPC5P78333 572 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 CDR2Q01850 454 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 TCEAL1Q15170 157 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 PTPROQ16827 1216 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 GLE1Q53GS7 698 aaKnown RBP17.04■□□□□ 0.32
C9orf78-201ENST00000372447 PPP2R2DQ66LE6 453 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 TMEM173Q86WV6 379 aaPredicted RBP17.04■□□□□ 0.32
C9orf78-201ENST00000372447 HES6Q96HZ4 224 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 ZNF558Q96NG5 402 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 MTUS1Q9ULD2 1270 aa17.04■□□□□ 0.32
C9orf78-201ENST00000372447 PRG3Q9Y2Y8 225 aaPredicted RBP17.04■□□□□ 0.32
C9orf78-201ENST00000372447 PDCD11Q14690 1871 aaKnown RBP17.03■□□□□ 0.32
C9orf78-201ENST00000372447 FAM170AA1A519 330 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 PODXLO00592 558 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 PPEF2O14830 753 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 ZMYND10O75800 440 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 VNN1O95497 513 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 ITGB3P05106 788 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 KRT5P13647 590 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
C9orf78-201ENST00000372447 C9orf57Q5W0N0 161 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 CCNI2Q6ZMN8 369 aaPredicted RBP17.03■□□□□ 0.32
C9orf78-201ENST00000372447 C3orf58Q8NDZ4 430 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 ACTRT1Q8TDG2 376 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 DDX1Q92499 740 aaKnown RBP17.03■□□□□ 0.32
C9orf78-201ENST00000372447 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
C9orf78-201ENST00000372447 UROC1Q96N76 676 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
C9orf78-201ENST00000372447 CERS4Q9HA82 394 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 AAASQ9NRG9 546 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 SIX4Q9UIU6 781 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 COG5Q9UP83 839 aa17.03■□□□□ 0.32
C9orf78-201ENST00000372447 PIRO00625 290 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms