RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 ATF2P15336 505 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 ATF7P17544 494 aaPredicted RBP13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 CCT5P48643 541 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 PPP2R2AP63151 447 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 PTPN11Q06124 597 aaPredicted RBP13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 TMEM62Q0P6H9 643 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 KIZQ2M2Z5 673 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 SPRYD7Q5W111 196 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 ICE2Q659A1 982 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 SPOCD1Q6ZMY3 1216 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 NIPA2Q8N8Q9 360 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 JOSD2Q8TAC2 188 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 RAPGEF5Q92565 580 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 TLCD1Q96CP7 247 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 PARK7Q99497 189 aaKnown RBP13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 CYP3A43Q9HB55 503 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 ANAPC5Q9UJX4 755 aa13.44□□□□□ -0.26
TSC22D3-206ENST00000372397 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 MICAL2O94851 1124 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 P4HA1P13674 534 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 PSMA2P25787 234 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 CHKAP35790 457 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 PTGISQ16647 500 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 PRAMEF19Q5SWL8 479 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 HEXIM2Q96MH2 286 aaKnown RBP13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 EPN3Q9H201 632 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 SLC12A6Q9UHW9 1150 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 GINS2Q9Y248 185 aa13.43□□□□□ -0.26
TSC22D3-206ENST00000372397 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 TJP3O95049 919 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 ERBB2P04626 1255 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 FKBP1BP68106 108 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 RBP5P82980 135 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 FAM110CQ1W6H9 321 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 TRMT10CQ7L0Y3 403 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 GSTA5Q7RTV2 222 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 PRUNE1Q86TP1 453 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 ZNF410Q86VK4 478 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 XYLT1Q86Y38 959 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 C2orf69Q8N8R5 385 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 FAM49AQ9H0Q0 323 aaPredicted RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CXCL16Q9H2A7 254 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CDC42EP4Q9H3Q1 356 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 YY1AP1Q9H869 796 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 DDX56Q9NY93 547 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 ITGA11Q9UKX5 1188 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 LRRD1A4D1F6 860 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 LIASO43766 372 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CELF2O95319 508 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 NPTXRO95502 500 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 GRM5P41594 1212 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 SEC24CP53992 1094 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 COPS2P61201 443 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CAV1Q03135 178 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 BYSLQ13895 437 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CNGA2Q16280 664 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 C6orf118Q5T5N4 469 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 ARFGAP1Q8N6T3 406 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 EMC1Q8N766 993 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CCDC89Q8N998 374 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 UBA3Q8TBC4 463 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 PGM2Q96G03 612 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 PWWP2AQ96N64 755 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 DNAJC17Q9NVM6 304 aaKnown RBP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 DNPEPQ9ULA0 475 aa13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.42□□□□□ -0.26
TSC22D3-206ENST00000372397 DOCK3Q8IZD9 2030 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 hCG_1818297A0A087WSY0 165 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 RRN3P2A6NIE6 340 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 SLC15A5A6NIM6 579 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 M0QYV0 167 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 NDUFAB1O14561 156 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 RGS16O15492 202 aaPredicted RBP13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 VDRP11473 427 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 KLRC2P26717 231 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 CDKN2BP42772 138 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 NDST1P52848 882 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 ZNF268Q14587 947 aaPredicted RBP13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 TFDP3Q5H9I0 405 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 EPS8L3Q8TE67 593 aaKnown RBP13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 TMEM109Q9BVC6 243 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 ZWILCHQ9H900 591 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 METTL5Q9NRN9 209 aaKnown RBP13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 WDR35Q9P2L0 1181 aa13.41□□□□□ -0.26
TSC22D3-206ENST00000372397 CPA4Q9UI42 421 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms