RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CCT7Q99832 543 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 TRIM62Q9BVG3 475 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 ROPN1BQ9BZX4 212 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 ROPN1Q9HAT0 212 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 AGPAT3Q9NRZ7 376 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 SLC30A1Q9Y6M5 507 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 PSMD3O43242 534 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 RPA1P27694 616 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 MRPL28Q13084 256 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 DEPDC1Q5TB30 811 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 HORMAD1Q86X24 394 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 GPBP1L1Q9HC44 474 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 FAM107AO95990 144 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 CCDC92Q53HC0 331 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 DAB2IPQ5VWQ8 1189 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 ZNF512Q96ME7 567 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 KAT2BQ92831 832 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 CYP2B6P20813 491 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 PWP1Q13610 501 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 TFB1MQ8WVM0 346 aaKnown RBP24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 BTN2A2Q8WVV5 523 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 GRID1Q9ULK0 1009 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 KIAA0391O15091 583 aaKnown RBP24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 PMPCBO75439 489 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 ITGA4P13612 1032 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 KCNV1Q6PIU1 500 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 SLC13A5Q86YT5 568 aaPredicted RBP24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 KIRREL3Q8IZU9 778 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 OR1G1P47890 313 aa24.92■■□□□ 1.58
RAPGEF1-203ENST00000372195 FOXP2O15409 715 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 RHOBTB1O94844 696 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 GH1P01241 217 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 VCPKMTQ9H867 229 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 MADDQ8WXG6 1647 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 KCTD10Q9H3F6 313 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 HEY2Q9UBP5 337 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 PNPLA6Q8IY17 1366 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 RPS6KA5O75582 802 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 CORO7P57737 925 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 TRAPPC11Q7Z392 1133 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 SERPINB10P48595 397 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 PDK1Q15118 436 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 FBXO36Q8NEA4 188 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 SYNDIG1Q9H7V2 258 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 FAM32AQ9Y421 112 aaKnown RBP24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 CYBBP04839 570 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 TCF7P36402 384 aaPredicted RBP24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 MLH1P40692 756 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 GLRBP48167 497 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 RCN1Q15293 331 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 ANKS3Q6ZW76 656 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 CNDP1Q96KN2 507 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 ZSWIM1Q9BR11 485 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 UNKQ9C0B0 810 aaKnown RBP24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 CAAP1Q9H8G2 361 aa24.91■■□□□ 1.58
RAPGEF1-203ENST00000372195 NIF3L1Q9GZT8 377 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 PNMA8BQ9ULN7 279 aaPredicted RBP24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 PTGER2P43116 358 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 GTF2H3Q13889 308 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 IL18RAPO95256 599 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 CUL2Q13617 745 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 MEI1Q5TIA1 1274 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 CAPN10Q9HC96 672 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 KCND2Q9NZV8 630 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 NAGPAQ9UK23 515 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 C2CD2LO14523 706 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 RFX5P48382 616 aaPredicted RBP24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 KCNK10P57789 538 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.9■■□□□ 1.585e-7■■■■■ 62
RAPGEF1-203ENST00000372195 CPB2Q96IY4 423 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 ZNRF3Q9ULT6 936 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 RUVBL2Q9Y230 463 aaKnown RBP24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 IGSF9BQ9UPX0 1349 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 HSPA1AP0DMV8 641 aaKnown RBP24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 HSPA1BP0DMV9 641 aaKnown RBP24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 MTMR12Q9C0I1 747 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 SEMA6BQ9H3T3 888 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 EXOSC4Q9NPD3 245 aaKnown RBP24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 OSGEPQ9NPF4 335 aa24.9■■□□□ 1.58
RAPGEF1-203ENST00000372195 WDR48Q8TAF3 677 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 ZNF556Q9HAH1 456 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 TFE3P19532 575 aaPredicted RBP24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 SV2CQ496J9 727 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 CBWD2Q8IUF1 395 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 ATG4CQ96DT6 458 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 DDX50Q9BQ39 737 aaKnown RBP24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 STILQ15468 1287 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 CYB5D1Q6P9G0 228 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 YAF2Q8IY57 180 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 FBXO28Q9NVF7 368 aa24.89■■□□□ 1.58
RAPGEF1-203ENST00000372195 RNF17Q9BXT8 1623 aaKnown RBP24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 TRIM28Q13263 835 aaKnown RBP24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 PCYOX1LQ8NBM8 494 aa24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 HES6Q96HZ4 224 aa24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 CCDC134Q9H6E4 229 aa24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 FDX1P10109 184 aa24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 RIN3Q8TB24 985 aa24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 ERGIC2Q96RQ1 377 aa24.89■■□□□ 1.57
RAPGEF1-203ENST00000372195 CEP152O94986 1710 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms