RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PSMD11O00231 422 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 TBXAS1P24557 533 aaPredicted RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 MCCD1P59942 119 aaPredicted RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 NEK5Q6P3R8 708 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 MTDHQ86UE4 582 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 AMNQ9BXJ7 453 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 CCSER2Q9H7U1 834 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ECE2O60344 883 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 RCVRNP35243 200 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PURAQ00577 322 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 COMMD2Q86X83 199 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 GATAD2AQ86YP4 633 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 CCDC33Q8N5R6 958 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 CAPN10Q9HC96 672 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 RIC8BQ9NVN3 520 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 C15orf41Q9Y2V0 281 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ADCY6O43306 1168 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 TRMT5Q32P41 509 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PROSER1Q86XN7 944 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 FAM172AQ8WUF8 416 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PRRG3Q9BZD7 231 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 MCUBQ9NWR8 336 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 GALNT8Q9NY28 637 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 SH3TC1Q8TE82 1336 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 EXTL3O43909 919 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ECDO95905 644 aaPredicted RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ARHGEF26Q96DR7 871 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PCP11498 1178 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PYDC2Q56P42 97 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PERM1Q5SV97 790 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 KDM7AQ6ZMT4 941 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 PEG10Q86TG7 708 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 CCDC185Q8N715 623 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF224Q9NZL3 707 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 YTHDC2Q9H6S0 1430 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 HIST1H2AGP0C0S8 130 aaPredicted RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 HIST1H2ADP20671 130 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 TAP1Q03518 808 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF235Q14590 738 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 FBXO42Q6P3S6 717 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 HIST1H2AHQ96KK5 128 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 HIST1H2AJQ99878 128 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 H2AFJQ9BTM1 129 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 RAB6BQ9NRW1 208 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF180Q9UJW8 692 aa15.89■□□□□ 0.13
GTF3C4-201ENST00000372146 NR5A2O00482 541 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 TBC1D12O60347 775 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 GEMIN4P57678 1058 aaKnown RBP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CBFBQ13951 182 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 RASA2Q15283 850 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 ASAP3Q8TDY4 903 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 APOL5Q9BWW9 433 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CITO14578 2027 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 EIF3DO15371 548 aaKnown RBP eCLIP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CLDN3O15551 220 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 NDUFS3O75489 264 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 LBPP18428 481 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 FNTAP49354 379 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 PEX3P56589 373 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 YWHAZP63104 245 aaKnown RBP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 DSTYKQ6XUX3 929 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CYP4Z2PQ8N1L4 340 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 SLC35G2Q8TBE7 412 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 RASSF5Q8WWW0 418 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF184Q99676 751 aaPredicted RBP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 FAM25EA8MYX2 175 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 NFICP08651 508 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF554Q86TJ5 538 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 ZBTB38Q8NAP3 1195 aaPredicted RBP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 PSMA8Q8TAA3 256 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 NUAK2Q9H093 628 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 PLXNC1O60486 1568 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 MYH1P12882 1939 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 MYH2Q9UKX2 1941 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 MYH4Q9Y623 1939 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 YY1P25490 414 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 GTF2H1P32780 548 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 AVPR1AP37288 418 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CCT8P50990 548 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CTSWP56202 376 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 MROH9Q5TGP6 573 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 SLC13A5Q86YT5 568 aaPredicted RBP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 THEM5Q8N1Q8 247 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 ANTXR1Q9H6X2 564 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CCNCP24863 283 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 PGS1Q32NB8 556 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 TRPC4APQ8TEL6 797 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 ILKAPQ9H0C8 392 aaPredicted RBP15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 EFCAB1Q9HAE3 211 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 GRID1Q9ULK0 1009 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 WDR62O43379 1518 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 MSH3P20585 1137 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CEBPGP53567 150 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 POU4F1Q01851 419 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 CACHD1Q5VU97 1274 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 TRIM65Q6PJ69 517 aa15.88■□□□□ 0.13
GTF3C4-201ENST00000372146 TTC26A0AVF1 554 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms