RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ZNF252P-AS1Q0IIN9 211 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 PDCLQ13371 301 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 PKDCCQ504Y2 493 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 PPP1R26Q5T8A7 1209 aaPredicted RBP18.55■□□□□ 0.56
SSBP3-203ENST00000371319 ARHGAP17Q68EM7 881 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 CCDC70Q6NSX1 233 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 DPH6Q7L8W6 267 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 OSTM1Q86WC4 334 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 XYLT1Q86Y38 959 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 TOP6BLQ8N6T0 577 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 TSPYL2Q9H2G4 693 aaPredicted RBP18.55■□□□□ 0.56
SSBP3-203ENST00000371319 CACNG4Q9UBN1 327 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 IP6K2Q9UHH9 426 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 DMGDHQ9UI17 866 aaKnown RBP18.55■□□□□ 0.56
SSBP3-203ENST00000371319 PTPN22Q9Y2R2 807 aa18.55■□□□□ 0.56
SSBP3-203ENST00000371319 PCNTO95613 3336 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 KRIT1O00522 736 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 SEC31AO94979 1220 aaKnown RBP18.54■□□□□ 0.56
SSBP3-203ENST00000371319 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.566e-7■■□□□ 13.6
SSBP3-203ENST00000371319 PYGMP11217 842 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 WARSP23381 471 aaKnown RBP18.54■□□□□ 0.56
SSBP3-203ENST00000371319 CDK7P50613 346 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 RWDD2BP57060 319 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 OGDHQ02218 1023 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 LONRF2Q1L5Z9 754 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 DAB2IPQ5VWQ8 1189 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 C8orf74Q6P047 294 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 TMCO3Q6UWJ1 677 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 ZNF598Q86UK7 904 aaKnown RBP18.54■□□□□ 0.56
SSBP3-203ENST00000371319 CRYBG2Q8N1P7 616 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 APPL2Q8NEU8 664 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 HNRNPLLQ8WVV9 542 aaKnown RBP18.54■□□□□ 0.56
SSBP3-203ENST00000371319 RUBCNQ92622 972 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 C18orf8Q96DM3 657 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 MCEEQ96PE7 176 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 LPIN3Q9BQK8 851 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 SNX25Q9H3E2 840 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 RSAD1Q9HA92 442 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 CENPFP49454 3210 aa18.54■□□□□ 0.56
SSBP3-203ENST00000371319 TDRD15B5MCY1 1934 aaKnown RBP18.54■□□□□ 0.56
SSBP3-203ENST00000371319 SIGLEC16A6NMB1 481 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 A8MXQ7 604 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 CCDC188H7C350 402 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 DNM1LO00429 736 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 HUS1O60921 280 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 LMO2P25791 158 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 GNL1P36915 607 aaPredicted RBP18.53■□□□□ 0.56
SSBP3-203ENST00000371319 TAS2R40P59535 323 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 PSMC1P62191 440 aaKnown RBP18.53■□□□□ 0.56
SSBP3-203ENST00000371319 SLC7A5Q01650 507 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 ZNF268Q14587 947 aaPredicted RBP18.53■□□□□ 0.56
SSBP3-203ENST00000371319 TTC30AQ86WT1 665 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 ECHDC2Q86YB7 292 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 KLHL7Q8IXQ5 586 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 ADGRF2Q8IZF7 708 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 MCRS1Q96EZ8 462 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 DDX27Q96GQ7 796 aaKnown RBP18.53■□□□□ 0.56
SSBP3-203ENST00000371319 PAK6Q9NQU5 681 aaPredicted RBP18.53■□□□□ 0.56
SSBP3-203ENST00000371319 FAM49BQ9NUQ9 324 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 WDR35Q9P2L0 1181 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 LCMT1Q9UIC8 334 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 NR2E1Q9Y466 385 aa18.53■□□□□ 0.56
SSBP3-203ENST00000371319 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.53■□□□□ 0.56
SSBP3-203ENST00000371319 GOLGA8SH3BPF8 625 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 PODXLO00592 558 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 CYB561D2O14569 222 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 ZMYND10O75800 440 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 PDGFRBP09619 1106 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 FAM163BP0C2L3 166 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 SKIP12755 728 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 MCM3P25205 808 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 CLCNKBP51801 687 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 CLUL1Q15846 466 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 SEL1L2Q5TEA6 688 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 RTN4RL1Q86UN2 441 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-203ENST00000371319 RNF169Q8NCN4 708 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-203ENST00000371319 LINC01599Q8WXQ3 324 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 PGBD4Q96DM1 585 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 NAP1L3Q99457 506 aaPredicted RBP18.52■□□□□ 0.56
SSBP3-203ENST00000371319 RGS18Q9NS28 235 aa18.52■□□□□ 0.56
SSBP3-203ENST00000371319 RAD51CO43502 376 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 PSTPIP1O43586 416 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 SETSIPP0DME0 302 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 MTFR1Q15390 333 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 BEND6Q5SZJ8 279 aaPredicted RBP18.51■□□□□ 0.55
SSBP3-203ENST00000371319 DCUN1D2Q6PH85 259 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 NIPA2Q8N8Q9 360 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 C3orf58Q8NDZ4 430 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 JOSD2Q8TAC2 188 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 SEZ6LQ9BYH1 1024 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 UBN1Q9NPG3 1134 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 STIM2Q9P246 746 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 USTQ9Y2C2 406 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 TULP2O00295 520 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 INPPL1O15357 1258 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 ERLIN1O75477 346 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 RPL9P32969 192 aaKnown RBP18.51■□□□□ 0.55
SSBP3-203ENST00000371319 CCNI2Q6ZMN8 369 aaPredicted RBP18.51■□□□□ 0.55
SSBP3-203ENST00000371319 SLC13A5Q86YT5 568 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms