RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ROR1Q01973 937 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 FBXO47Q5MNV8 452 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 NOL9Q5SY16 702 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 C12orf56Q8IXR9 622 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 PLCD4Q9BRC7 762 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 NTPCRQ9BSD7 190 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 R3HDMLQ9H3Y0 253 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 DDX56Q9NY93 547 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 LTBP3Q9NS15 1303 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 TTLL13PA6NNM8 815 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 MT-ND3P03897 115 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 MCF2P10911 925 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 GPD1P21695 349 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 FECHP22830 423 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 PPP2R2AP63151 447 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 TAP1Q03518 808 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 HEATR6Q6AI08 1181 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 SLC39A4Q6P5W5 647 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 SLC27A1Q6PCB7 646 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ACTL9Q8TC94 416 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 CCHCR1Q8TD31 782 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ZNF516Q92618 1163 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 L3MBTL3Q96JM7 780 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 GAD1Q99259 594 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 KLF6Q99612 283 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 GOLGA2P5Q9HBQ8 144 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ALG13Q9NP73 1137 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 CYB561D2O14569 222 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 VDRP11473 427 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ICAM3P32942 547 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 OR1G1P47890 313 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 PSEN2P49810 448 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SULT1E1P49888 294 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 FCGRTP55899 365 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SESN2P58004 480 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 TSPY1Q01534 308 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 MTHFD1LQ6UB35 978 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 PID1Q7Z2X4 250 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 LRRC8CQ8TDW0 803 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 NSMCE1Q8WV22 266 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 TRAIPQ9BWF2 469 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 RASSF4Q9H2L5 321 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ASB7Q9H672 318 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 MINDY3Q9H8M7 445 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SMYD2Q9NRG4 433 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 TNFSF13BQ9Y275 285 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 STK38LQ9Y2H1 464 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 MYH10P35580 1976 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 MANSC4A6NHS7 340 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 E5RJQ4 531 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ASS1P00966 412 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ZSCAN5DPP0CG00 497 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SMIM10L2AP0DMW4 78 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SMIM10L2BP0DMW5 78 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ATP4AP20648 1035 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 JAM2P57087 298 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 OTUD4Q01804 1114 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SREBF2Q12772 1141 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 HIF1AQ16665 826 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ARL13BQ3SXY8 428 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM182AQ5T1J6 154 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 THEM5Q8N1Q8 247 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 TTC39CQ8N584 583 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 SLC7A14Q8TBB6 771 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 LRRN4Q8WUT4 740 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 FIZ1Q96SL8 496 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 NIFKQ9BYG3 293 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 KLC2Q9H0B6 622 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 NXF3Q9H4D5 531 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ST6GALNAC4Q9H4F1 302 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 APOBEC3GQ9HC16 384 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 KLHL14Q9P2G3 628 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 GGT7Q9UJ14 662 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 PCDHA3Q9Y5H8 950 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 TCRBV7S2A1N4TA0A589 114 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 RBAK-RBAKDNI3L0D1 243 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 I3L4J1 428 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 PPP1R37O75864 691 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 C4BPAP04003 597 aaKnown RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 CPB1P15086 417 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ITIH2P19823 946 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 GRIK1P39086 918 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ATN1P54259 1190 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 CCDC6Q16204 474 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 C15orf59Q2T9L4 293 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 DCAF4L1Q3SXM0 396 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 C11orf63Q6NUN7 778 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 ZNF662Q6ZS27 426 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 C4orf33Q8N1A6 199 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM172AQ8WUF8 416 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 RILPQ96NA2 401 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 BARX2Q9UMQ3 279 aaPredicted RBP7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 CHMP2BQ9UQN3 213 aa7.48□□□□□ -1.21
TGFBR3-202ENST00000370399 MAPK13O15264 365 aa7.47□□□□□ -1.21
TGFBR3-202ENST00000370399 TREHO43280 583 aa7.47□□□□□ -1.21
TGFBR3-202ENST00000370399 MICAL2O94851 1124 aa7.47□□□□□ -1.21
TGFBR3-202ENST00000370399 NCAM1P13591 858 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms