RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 APBB3O95704 486 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 DRD1P21728 446 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 BCKDHBP21953 392 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 PTPAQ15257 358 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 ELF2Q15723 593 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 ARSHQ5FYA8 562 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 SYT13Q7L8C5 426 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 TPSD1Q9BZJ3 242 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 RPF1Q9H9Y2 349 aaKnown RBP16.65■□□□□ 0.26
SSR4-204ENST00000370087 TDP1Q9NUW8 608 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 EBF1Q9UH73 591 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
SSR4-204ENST00000370087 XPOTO43592 962 aaKnown RBP16.64■□□□□ 0.25
SSR4-204ENST00000370087 RHOBTB1O94844 696 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 AVPR1AP37288 418 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 LIG4P49917 911 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 SMTNP53814 917 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 BFSP1Q12934 665 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
SSR4-204ENST00000370087 WSCD1Q658N2 575 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 PMS2CLQ68D20 193 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 SYT2Q8N9I0 419 aaPredicted RBP16.64■□□□□ 0.25
SSR4-204ENST00000370087 LRRC15Q8TF66 581 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 SLC22A12Q96S37 553 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 SCNM1Q9BWG6 230 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.25
SSR4-204ENST00000370087 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 WNT6Q9Y6F9 365 aa16.64■□□□□ 0.25
SSR4-204ENST00000370087 FREM2Q5SZK8 3169 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 ADAMTS9Q9P2N4 1935 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 DSPP15924 2871 aaKnown RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 A0A0B4J269 797 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 SRRM3A6NNA2 597 aaPredicted RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 TISP43B9A030 160 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 CYB561D2O14569 222 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 HNRNPDLO14979 420 aaKnown RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 GBP1P32455 592 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 DGKEP52429 567 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 GNL2Q13823 731 aaKnown RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 MTF1Q14872 753 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 TMEM132DQ14C87 1099 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 ZNF77Q15935 545 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 TAF12Q16514 161 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 CCDC142Q17RM4 750 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 HYIQ5T013 277 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 KIAA1211LQ6NV74 962 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 SPPL2BQ8TCT7 592 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 PYM1Q9BRP8 204 aaKnown RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 ECT2Q9H8V3 914 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 MAGED2Q9UNF1 606 aaPredicted RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.63■□□□□ 0.25
SSR4-204ENST00000370087 LAMA5O15230 3695 aa16.63■□□□□ 0.25
SSR4-204ENST00000370087 ASCC3Q8N3C0 2202 aaKnown RBP16.62■□□□□ 0.25
SSR4-204ENST00000370087 ITPR1Q14643 2758 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 PIGRP01833 764 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 DDX6P26196 483 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSR4-204ENST00000370087 USP4Q13107 963 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 PSMD2Q13200 908 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 ZNF268Q14587 947 aaPredicted RBP16.62■□□□□ 0.25
SSR4-204ENST00000370087 PDGFRLQ15198 375 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 DAB2IPQ5VWQ8 1189 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 MON1AQ86VX9 555 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 TTC16Q8NEE8 873 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 DEFB124Q8NES8 71 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 C2orf15Q8WU43 125 aaKnown RBP16.62■□□□□ 0.25
SSR4-204ENST00000370087 KCNN1Q92952 543 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 CD101Q93033 1021 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 REEP2Q9BRK0 252 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 PI4K2AQ9BTU6 479 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 MSTO1Q9BUK6 570 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 TMEM9BQ9NQ34 198 aa16.62■□□□□ 0.25
SSR4-204ENST00000370087 PLXND1Q9Y4D7 1925 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 ANKRD63C9JTQ0 380 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 KHNYNO15037 678 aaKnown RBP16.61■□□□□ 0.25
SSR4-204ENST00000370087 HNRNPLP14866 589 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSR4-204ENST00000370087 CSRP1P21291 193 aaKnown RBP16.61■□□□□ 0.25
SSR4-204ENST00000370087 PRPHP41219 470 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 ACOT2P49753 483 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 IRX4P78413 519 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 EML3Q32P44 896 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 FBXO43Q4G163 708 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 TMEM119Q4V9L6 283 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 SCARA3Q6AZY7 606 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 CC2D1AQ6P1N0 951 aaPredicted RBP16.61■□□□□ 0.25
SSR4-204ENST00000370087 DTHD1Q6ZMT9 781 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 CPA6Q8N4T0 437 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 OSCP1Q8WVF1 389 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 ZCCHC14Q8WYQ9 949 aaKnown RBP16.61■□□□□ 0.25
SSR4-204ENST00000370087 CYP2S1Q96SQ9 504 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.61■□□□□ 0.25
SSR4-204ENST00000370087 DUS2Q9NX74 493 aaKnown RBP16.61■□□□□ 0.25
SSR4-204ENST00000370087 ZMYM5Q9UJ78 669 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 DSEQ9UL01 958 aa16.61■□□□□ 0.25
SSR4-204ENST00000370087 LOC400499M0QZD8 3231 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms