RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PCDHA10Q9Y5I2 948 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 TET3O43151 1660 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 A0A1B0GTH6 734 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 MAGEA13PA6NCF6 341 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 EYA4O95677 639 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 AVPR1AP37288 418 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 PRIM2P49643 509 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 TTLL6Q8N841 843 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 C2orf69Q8N8R5 385 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 GPR63Q9BZJ6 419 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 RAD21L1Q9H4I0 556 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 ECE2O60344 883 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 ACADSP16219 412 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 NMT1P30419 496 aaKnown RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 GUCA1AP43080 201 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 MTM1Q13496 603 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 DCAF6Q58WW2 860 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 C12orf60Q5U649 245 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 SLC7A14Q8TBB6 771 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 DDI1Q8WTU0 396 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 TFB1MQ8WVM0 346 aaKnown RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 RAD18Q9NS91 495 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 NCAPD2Q15021 1401 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 PRDX5P30044 214 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 CELF4Q9BZC1 486 aaKnown RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 HMBSP08397 361 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 LRRC49Q8IUZ0 686 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 ZIM3Q96PE6 472 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 NOD2Q9HC29 1040 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 CEP152O94986 1710 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SNPHO15079 494 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KRT6AP02538 564 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KRT6BP04259 564 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KRT6CP48668 564 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 PDK1Q15118 436 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KCNF1Q9H3M0 494 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 UCHL3P15374 230 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 PTPN7P35236 360 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 PUDPQ08623 228 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SLC29A2Q14542 456 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 NR1I3Q14994 352 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 NAB2Q15742 525 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SIX5Q8N196 739 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KRT78Q8N1N4 520 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ADGRA3Q8IWK6 1321 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 PRKCBP05771 671 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 NPEPPSP55786 919 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 CYP51A1Q16850 503 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 PDCD10Q9BUL8 212 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 CD248Q9HCU0 757 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SLC39A10Q9ULF5 831 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ZNF839A8K0R7 811 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 AKR1B1P15121 316 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 RRM2P31350 389 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ATP12AP54707 1039 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 ACAD9Q9H845 621 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 MINPP1Q9UNW1 487 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 LOC100653049A0A140TA62 436 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 KRT34O76011 436 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 STKLD1Q8NE28 680 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 EPS8L2Q9H6S3 715 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 USP6P35125 1406 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 C21orf2O43822 256 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SRGNP10124 158 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 CSE1LP55060 971 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 RBP5P82980 135 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 DNAJC3Q13217 504 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 COG2Q14746 738 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 NDUFA5Q16718 116 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 PHKG1Q16816 387 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 SGSM1Q2NKQ1 1148 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 EFL1Q7Z2Z2 1120 aaKnown RBP12.94□□□□□ -0.34
HCFC1-202ENST00000369984 BNIPLQ7Z465 357 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 HIC2Q96JB3 615 aa12.94□□□□□ -0.34
HCFC1-202ENST00000369984 RNF112Q9ULX5 631 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms