RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 SLC39A4Q6P5W5 647 aa16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 OSBPL8Q9BZF1 889 aa16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 VPS37BQ9H9H4 285 aa16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 TBC1D22BQ9NU19 505 aa16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 SIPA1L1O43166 1804 aa16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 SCN9AQ15858 1988 aa16.79■□□□□ 0.28
SYNCRIP-202ENST00000369622 EXOC1LA0A1B0GW35 172 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 TRIM43BA6NCK2 446 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 WDR64B1ANS9 1081 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 MAP3K7O43318 606 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 STK10O94804 968 aaKnown RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 ASLP04424 464 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 FOXN2P32314 431 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 RASSF2P50749 326 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 HSD17B4P51659 736 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 NCKAP1LP55160 1127 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 ZNF394Q53GI3 561 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SWSAP1Q6NVH7 229 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 ARHGEF18Q6ZSZ5 1173 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SATL1Q86VE3 508 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SCUBE1Q8IWY4 988 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SIKE1Q9BRV8 207 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 ZNF536O15090 1300 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 BAG2O95816 211 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 APBA3O96018 575 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 VAV1P15498 845 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 LIG4P49917 911 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 NLRX1Q86UT6 975 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 MCF2L2Q86YR7 1114 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 GPD1LQ8N335 351 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 C12orf50Q8NA57 414 aaPredicted RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 CKAP2Q8WWK9 683 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 CCDC134Q9H6E4 229 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 TLR3O15455 904 aaKnown RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 PGM3O95394 542 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 PTK6Q13882 451 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 TCEAL1Q15170 157 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 TAF1BQ53T94 588 aaPredicted RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 TRIM50Q86XT4 487 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 C4orf19Q8IY42 314 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 ZBTB8BQ8NAP8 495 aaPredicted RBP16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 GLIS1Q8NBF1 620 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 SLC35B4Q969S0 331 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 MIPEPQ99797 713 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 CORO1BQ9BR76 489 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 ANKFY1Q9P2R3 1169 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 UBIAD1Q9Y5Z9 338 aa16.78■□□□□ 0.28
SYNCRIP-202ENST00000369622 CDH16O75309 829 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 PGM5Q15124 567 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 PARP6Q2NL67 630 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 RHBDF2Q6PJF5 856 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 IZUMO2Q6UXV1 221 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 LARGE2Q8N3Y3 721 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 ZNF516Q92618 1163 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 ERLEC1Q96DZ1 483 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 FAM192AQ9GZU8 254 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 ADGRA3Q8IWK6 1321 aa16.77■□□□□ 0.28
SYNCRIP-202ENST00000369622 MARK3P27448 753 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 DSG3P32926 999 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 MAGEA4P43358 317 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 MTERF2Q49AM1 385 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 LIN9Q5TKA1 542 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 PCNX4Q63HM2 1172 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 ANKS1BQ7Z6G8 1248 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 CENPKQ9BS16 269 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 PFDN4Q9NQP4 134 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 KRT82Q9NSB4 513 aa16.77■□□□□ 0.27
SYNCRIP-202ENST00000369622 USP1O94782 785 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 HLA-DRAP01903 254 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 UNGP13051 313 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 C4orf50Q6ZRC1 276 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 NCCRP1Q6ZVX7 275 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 NAT14Q8WUY8 206 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 STMN2Q93045 179 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 ZNF277Q9NRM2 450 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 INIPQ9NRY2 104 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 BARX2Q9UMQ3 279 aaPredicted RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 LY75O60449 1722 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 WDR91A4D1P6 747 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 TMEM221A6NGB7 291 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 ASNSP08243 561 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 TCF4P15884 667 aa16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 ADARP55265 1226 aaKnown RBP16.76■□□□□ 0.27
SYNCRIP-202ENST00000369622 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms