RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 GTF3C4Q9UKN8 822 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 MYBPHLA2RUH7 354 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 GADD45BO75293 160 aaPredicted RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 MYL4P12829 197 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 HMGA1P17096 107 aaKnown RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 GJA1P17302 382 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 NR2F2P24468 414 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 PCSK1P29120 753 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 CDR1P51861 262 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 GPC5P78333 572 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 ZNF658Q5TYW1 1059 aaPredicted RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 CWF19L1Q69YN2 538 aaKnown RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 TANGO2Q6ICL3 276 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 ELSPBP1Q96BH3 223 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 SEPT5Q99719 369 aaPredicted RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 MRPL45Q9BRJ2 306 aaKnown RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 CRTAC1Q9NQ79 661 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 ABI2Q9NYB9 513 aaPredicted RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 CDH9Q9ULB4 789 aa22■■□□□ 1.11
SMNDC1-201ENST00000369592 NUP210Q8TEM1 1887 aaPredicted RBP22■■□□□ 1.11
SMNDC1-201ENST00000369592 GFRA3O60609 400 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 ATP2C2O75185 946 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 PRCPP42785 496 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 TEAD2Q15562 447 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 WDR72Q3MJ13 1102 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 MGAT5BQ3V5L5 792 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 ITIH5Q86UX2 942 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 SUGP1Q8IWZ8 645 aaKnown RBP21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 ZC3H3Q8IXZ2 948 aaKnown RBP21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 GPR152Q8TDT2 470 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 ERCC4Q92889 916 aaPredicted RBP21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 SYAP1Q96A49 352 aaPredicted RBP21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 FUBP3Q96I24 572 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 KXD1Q9BQD3 176 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 GPR88Q9GZN0 384 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 RMND1Q9NWS8 449 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 FRMD4BQ9Y2L6 1034 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 R3HCC1Q9Y3T6 440 aaKnown RBP21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 COL4A2P08572 1712 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 F5P12259 2224 aa21.99■■□□□ 1.11
SMNDC1-201ENST00000369592 CFHP08603 1231 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 CYP2F1P24903 491 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 MAGEA11P43364 429 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 CLCN5P51795 746 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 TCF15Q12870 199 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 CEP135Q66GS9 1140 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 SV2AQ7L0J3 742 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 TMEM150AQ86TG1 271 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 TMEM105Q8N8V8 129 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 SMARCD2Q92925 531 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 SYT15Q9BQS2 421 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 PI4K2AQ9BTU6 479 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 FAM86C1Q9NVL1 165 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 CFAP54Q96N23 3096 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 NCANO14594 1321 aa21.98■■□□□ 1.11
SMNDC1-201ENST00000369592 A0A1W2PRU2 124 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 FGF19O95750 216 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 RPL13P26373 211 aaKnown RBP21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 WEE1P30291 646 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 GPR15P49685 360 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 ADAM9Q13443 819 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 TRPC3Q13507 836 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 NCOA4Q13772 614 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 ASTLQ6HA08 431 aaPredicted RBP21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 SIX5Q8N196 739 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 PRRX2Q99811 253 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 CHMP5Q9NZZ3 219 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 ANAPC1Q9H1A4 1944 aa21.97■■□□□ 1.11
SMNDC1-201ENST00000369592 SMC2O95347 1197 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 PSMC2P35998 433 aaKnown RBP21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 GNL1P36915 607 aaPredicted RBP21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 VAMP7P51809 220 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 NUBP1P53384 320 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 PPP3CAQ08209 521 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 STXBP5Q5T5C0 1151 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 INTS8Q75QN2 995 aaKnown RBP21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 ADSSL1Q8N142 457 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 MYCBPAPQ8TBZ2 947 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 GIPC2Q8TF65 315 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 SMARCE1Q969G3 411 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 RSPRY1Q96DX4 576 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 MYRFLQ96LU7 910 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 MMS19Q96T76 1030 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 GTPBP4Q9BZE4 634 aaKnown RBP21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 ZFP14Q9HCL3 533 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 FBXL21Q9UKT6 434 aa21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 ZNF638Q14966 1978 aaKnown RBP21.96■■□□□ 1.11
SMNDC1-201ENST00000369592 KIF26AQ9ULI4 1882 aaPredicted RBP21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 PHACTR2O75167 634 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 NOL4O94818 638 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 ASS1P00966 412 aaKnown RBP21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 F11P03951 625 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 PDGFRBP09619 1106 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 AOC1P19801 751 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 BMP6P22004 513 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 GABRR2P28476 465 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 PMS1P54277 932 aaKnown RBP21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 PSMC1P62191 440 aaKnown RBP21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 TNNC1P63316 161 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 FOXK2Q01167 660 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms