RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 RNASELQ05823 741 aaKnown RBP25.32■■□□□ 1.64
SNX3-203ENST00000368979 PAN2Q504Q3 1202 aaKnown RBP25.32■■□□□ 1.64
SNX3-203ENST00000368979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.32■■□□□ 1.64
SNX3-203ENST00000368979 TNIP3Q96KP6 325 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 NUP85Q9BW27 656 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 CHORDC1Q9UHD1 332 aaPredicted RBP25.32■■□□□ 1.64
SNX3-203ENST00000368979 CYTH4Q9UIA0 394 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 CYP11A1P05108 521 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 ITGB1P05556 798 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 GPD2P43304 727 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 LHX1P48742 406 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 GOLGA7BQ2TAP0 167 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 PKDCCQ504Y2 493 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 C2CD6Q53TS8 623 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 LIN9Q5TKA1 542 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 ZNF564Q8TBZ8 553 aaPredicted RBP25.32■■□□□ 1.64
SNX3-203ENST00000368979 SUSD3Q96L08 255 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 FAM193BQ96PV7 902 aaPredicted RBP25.32■■□□□ 1.64
SNX3-203ENST00000368979 FAM49BQ9NUQ9 324 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 DNAJB4Q9UDY4 337 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 MRFAP1Q9Y605 127 aa25.32■■□□□ 1.64
SNX3-203ENST00000368979 F8W810 466 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 BUB1BO60566 1050 aaPredicted RBP25.31■■□□□ 1.64
SNX3-203ENST00000368979 CALB1P05937 261 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 RAG1P15918 1043 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 MFSD5Q6N075 450 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 SYCE1Q8N0S2 351 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 HASPINQ8TF76 798 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 ABHD8Q96I13 439 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 MRPL9Q9BYD2 267 aaKnown RBP25.31■■□□□ 1.64
SNX3-203ENST00000368979 NRDE2Q9H7Z3 1164 aa25.31■■□□□ 1.64
SNX3-203ENST00000368979 DDX43Q9NXZ2 648 aaKnown RBP25.31■■□□□ 1.64
SNX3-203ENST00000368979 FNDC1Q4ZHG4 1894 aaPredicted RBP25.31■■□□□ 1.64
SNX3-203ENST00000368979 I3L4J1 428 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 RIOK3O14730 519 aaKnown RBP25.3■■□□□ 1.64
SNX3-203ENST00000368979 FTCDO95954 541 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 PFKMP08237 780 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 CSF2RAP15509 400 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 PTPN20Q4JDL3 420 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 MEI1Q5TIA1 1274 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 PLEKHA7Q6IQ23 1121 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 ERICH1Q86X53 443 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 B3GALNT2Q8NCR0 500 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 LPIN3Q9BQK8 851 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 ABCB6Q9NP58 842 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 DSEQ9UL01 958 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 TIMM13Q9Y5L4 95 aaPredicted RBP25.3■■□□□ 1.64
SNX3-203ENST00000368979 MYH10P35580 1976 aa25.3■■□□□ 1.64
SNX3-203ENST00000368979 KIAA0100Q14667 2235 aaKnown RBP25.3■■□□□ 1.64
SNX3-203ENST00000368979 ABHD14A-ACY1A0A1B0GW23 586 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 OR1G1P47890 313 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 KIAA0319Q5VV43 1072 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 C11orf63Q6NUN7 778 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 LLGL2Q6P1M3 1020 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 DAAM2Q86T65 1068 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 TTC30AQ86WT1 665 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 TMEM199Q8N511 208 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 UBA3Q8TBC4 463 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 TLR10Q9BXR5 811 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 GOLPH3Q9H4A6 298 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 COL4A6Q14031 1691 aa25.29■■□□□ 1.64
SNX3-203ENST00000368979 TCRBV5S1A1TA0A578 114 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 ARHGEF37A1IGU5 675 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 CCDC130P13994 396 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 ACAT1P24752 427 aaKnown RBP25.28■■□□□ 1.64
SNX3-203ENST00000368979 GSCP56915 257 aaPredicted RBP25.28■■□□□ 1.64
SNX3-203ENST00000368979 PSMC1P62191 440 aaKnown RBP25.28■■□□□ 1.64
SNX3-203ENST00000368979 PDCLQ13371 301 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 TUBB2AQ13885 445 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 CPXM1Q96SM3 734 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 TUBB2BQ9BVA1 445 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 CDC23Q9UJX2 597 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 SCINQ9Y6U3 715 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 ALPK3Q96L96 1907 aa25.28■■□□□ 1.64
SNX3-203ENST00000368979 TBKBP1A7MCY6 615 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 NCK2O43639 380 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 SETSIPP0DME0 302 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 PTPN1P18031 435 aaKnown RBP25.27■■□□□ 1.64
SNX3-203ENST00000368979 TYMPP19971 482 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 RTP3Q9BQQ7 232 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 SYT15Q9BQS2 421 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 HESX1Q9UBX0 185 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 STRIP2Q9ULQ0 834 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 SNX12Q9UMY4 172 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 PCDHB8Q9UN66 801 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 SAR1BQ9Y6B6 198 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 ATP2C2O75185 946 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 PRLRP16471 622 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 GABRB2P47870 512 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 MAMLD1Q13495 774 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 PHLDB2Q86SQ0 1253 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 NT5DC3Q86UY8 548 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 METTL23Q86XA0 190 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 LRRC43Q8N309 656 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 MSANTD4Q8NCY6 345 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 HNRNPABQ99729 332 aaKnown RBP25.27■■□□□ 1.64
SNX3-203ENST00000368979 TMEM175Q9BSA9 504 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 MRPL47Q9HD33 250 aaKnown RBP25.27■■□□□ 1.64
SNX3-203ENST00000368979 CRTAC1Q9NQ79 661 aa25.27■■□□□ 1.64
SNX3-203ENST00000368979 PARVAQ9NVD7 372 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms