RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 POLBP06746 335 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 NR3C2P08235 984 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 TFE3P19532 575 aaPredicted RBP18.9■□□□□ 0.62
SNX27-202ENST00000368841 FXR1P51114 621 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNX27-202ENST00000368841 CNDP1Q96KN2 507 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 EPN3Q9H201 632 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 RASSF10A6NK89 507 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 SGPL1O95470 568 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 TEX13BQ9BXU2 312 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 ENO4A6NNW6 628 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 TSC22D2O75157 780 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 DGAT1O75907 488 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 ASS1P00966 412 aaKnown RBP18.9■□□□□ 0.62
SNX27-202ENST00000368841 PLEKP08567 350 aaPredicted RBP18.9■□□□□ 0.62
SNX27-202ENST00000368841 HUNKP57058 714 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 TARS2Q9BW92 718 aaKnown RBP18.9■□□□□ 0.62
SNX27-202ENST00000368841 C17orf102A2RUQ5 167 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 ZBTB22O15209 634 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 P4HA2O15460 535 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 ZSWIM2Q8NEG5 633 aa18.9■□□□□ 0.62
SNX27-202ENST00000368841 GIMAP4Q9NUV9 329 aa18.89■□□□□ 0.62
SNX27-202ENST00000368841 UBP1Q9NZI7 540 aa18.89■□□□□ 0.62
SNX27-202ENST00000368841 HOXA7P31268 230 aaPredicted RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 CAPRIN2Q6IMN6 1127 aaKnown RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 USP49Q70CQ1 688 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 PIH1D1Q9NWS0 290 aaKnown RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 TMEM120BA0PK00 339 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 B2RBV5 119 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 STRNO43815 780 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 CD4P01730 458 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 APOA4P06727 396 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 PDHBP11177 359 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 CTCFP49711 727 aaPredicted RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 TRIP4Q15650 581 aaPredicted RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 ACOT1Q86TX2 421 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 ATG4CQ96DT6 458 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 SEC16BQ96JE7 1060 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 THUMPD3Q9BV44 507 aaKnown RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 MANSC1Q9H8J5 431 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 LAMC1P11047 1609 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 NBPF26B4DH59 902 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 ALOX15P16050 662 aaPredicted RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 ALDH7A1P49419 539 aaKnown RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 NBPF15Q8N660 670 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 OLFM3Q96PB7 478 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 MTMR12Q9C0I1 747 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 PSD3Q9NYI0 1048 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 CDHR2Q9BYE9 1310 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 KLRK1P26718 216 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 KCNB1Q14721 858 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 TRIP10Q15642 601 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 PPP1R14AQ96A00 147 aa18.89■□□□□ 0.61
SNX27-202ENST00000368841 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 IARS2Q9NSE4 1012 aaKnown RBP18.89■□□□□ 0.61
SNX27-202ENST00000368841 A8MX80 341 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 PSMD3O43242 534 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 FAM200BP0CF97 657 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 ZNF286BP0CG31 522 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 EPHB2P29323 1055 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 SERPINB10P48595 397 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 SOX10P56693 466 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 TRIM69Q86WT6 500 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 KCNB2Q92953 911 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 OSGEPL1Q9H4B0 414 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 UBE2Q2LH0YL09 131 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 MAPRE1Q15691 268 aaKnown RBP18.88■□□□□ 0.61
SNX27-202ENST00000368841 EML3Q32P44 896 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 RD3Q7Z3Z2 195 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 CENPTQ96BT3 561 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 CEP41Q9BYV8 373 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 NFIBO00712 420 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 EXTL3O43909 919 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 THAP2Q9H0W7 228 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 CYP7B1O75881 506 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 ABCB1P08183 1280 aaPredicted RBP18.88■□□□□ 0.61
SNX27-202ENST00000368841 PLCL1Q15111 1095 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 ARHGAP15Q53QZ3 475 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 NFKBIZQ9BYH8 718 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 OSBPL8Q9BZF1 889 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 SNX8Q9Y5X2 465 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 F8W810 466 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 JAMLQ86YT9 394 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 FBXO16Q8IX29 292 aaPredicted RBP18.88■□□□□ 0.61
SNX27-202ENST00000368841 ECSITQ9BQ95 431 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 RUSC1Q9BVN2 902 aa18.88■□□□□ 0.61
SNX27-202ENST00000368841 CASTOR2A6NHX0 329 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 PTGER2P43116 358 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 TTC39CQ8N584 583 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 RPRD1AQ96P16 312 aaPredicted RBP18.87■□□□□ 0.61
SNX27-202ENST00000368841 MXRA8Q9BRK3 442 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 DDIT4Q9NX09 232 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 OOSP2Q86WS3 158 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 SEMA4DQ92854 862 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 MED8Q96G25 268 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 FAM129AQ9BZQ8 928 aa18.87■□□□□ 0.61
SNX27-202ENST00000368841 N6AMT1Q9Y5N5 214 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms