RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZSWIM1Q9BR11 485 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 DPEP3Q9H4B8 488 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 HCSTQ9UBK5 93 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 HESX1Q9UBX0 185 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 NME7Q9Y5B8 376 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 FTLP02792 175 aaPredicted RBP13.06□□□□□ -0.32
TUBE1-202ENST00000368662 NOMO3P69849 1222 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 TSPY1Q01534 308 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 FIBCD1Q8N539 461 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 C12orf29Q8N999 325 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 TMEM169Q96HH4 297 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 IGSF21Q96ID5 467 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 VCPIP1Q96JH7 1222 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 NOX5Q96PH1 765 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 PCDH10Q9P2E7 1040 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 MRPL42Q9Y6G3 142 aaKnown RBP13.06□□□□□ -0.32
TUBE1-202ENST00000368662 USP27XA6NNY8 438 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 BTNL10A8MVZ5 291 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 NT5C1B-RDH14C9J2C7 533 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 MYBL1P10243 752 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 FGFR3P22607 806 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 TKTP29401 623 aaKnown RBP13.06□□□□□ -0.32
TUBE1-202ENST00000368662 SLC8A3P57103 927 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 PPP1R26Q5T8A7 1209 aaPredicted RBP13.06□□□□□ -0.32
TUBE1-202ENST00000368662 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
TUBE1-202ENST00000368662 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 LZTFL1Q9NQ48 299 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
TUBE1-202ENST00000368662 M0QYV0 167 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 TLL1O43897 1013 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 MICAL2O94851 1124 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 TUBB4AP04350 444 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 SETSIPP0DME0 302 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 ACAT1P24752 427 aaKnown RBP13.05□□□□□ -0.32
TUBE1-202ENST00000368662 PBX3P40426 434 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 GALCP54803 685 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 USP41Q3LFD5 358 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 INTS6LQ5JSJ4 861 aaKnown RBP13.05□□□□□ -0.32
TUBE1-202ENST00000368662 NAA35Q5VZE5 725 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 ZNF280DQ6N043 979 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 ANKS3Q6ZW76 656 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 PHF13Q86YI8 300 aaPredicted RBP13.05□□□□□ -0.32
TUBE1-202ENST00000368662 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 MYCBPAPQ8TBZ2 947 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
TUBE1-202ENST00000368662 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
TUBE1-202ENST00000368662 HNRNPABQ99729 332 aaKnown RBP13.05□□□□□ -0.32
TUBE1-202ENST00000368662 TTPALQ9BTX7 342 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 MIS12Q9H081 205 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 TSC2P49815 1807 aa13.05□□□□□ -0.32
TUBE1-202ENST00000368662 A0A0A6YYK5 440 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 H7C4K7 107 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 EFEMP2O95967 443 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CALB1P05937 261 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CFHP08603 1231 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 SNX16P57768 344 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 PSMC1P62191 440 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 MRPL58Q14197 206 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 ANKRD52Q8NB46 1076 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 RTP3Q9BQQ7 232 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 PACSIN1Q9BY11 444 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 MYO1AQ9UBC5 1043 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 GTF3C4Q9UKN8 822 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CEP290O15078 2479 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 PTPRSQ13332 1948 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 OR6C75A6NL08 312 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 KIF2AO00139 706 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 HCRTO43612 131 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 ABCB4P21439 1286 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 MMP8P22894 467 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 ARHGAP25P42331 645 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 GPD2P43304 727 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 BCAT1P54687 386 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 GPC5P78333 572 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 BST2Q10589 180 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 MDH1BQ5I0G3 518 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms