RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FAM83CQ9BQN1 747 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 CBWD1Q9BRT8 395 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 FGFBP2Q9BYJ0 223 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
CKS1B-202ENST00000368436 PANK4Q9NVE7 773 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 THG1LQ9NWX6 298 aaKnown RBP17.24■□□□□ 0.35
CKS1B-202ENST00000368436 GDAP2Q9NXN4 497 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 ITGA11Q9UKX5 1188 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 L1RE1Q9UN81 338 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 MTMR6Q9Y217 621 aa17.24■□□□□ 0.35
CKS1B-202ENST00000368436 EXTL3O43909 919 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 SDHBP21912 280 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 DDX6P26196 483 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■□□□□ 10.7
CKS1B-202ENST00000368436 DMWDQ09019 674 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 PON2Q15165 354 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 ITPRIPL2Q3MIP1 535 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 Q6ZS52 159 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 SPATA18Q8TC71 538 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 ABCB6Q9NP58 842 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 PARD6AQ9NPB6 346 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 GKN1Q9NS71 199 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 DDX43Q9NXZ2 648 aaKnown RBP17.23■□□□□ 0.35
CKS1B-202ENST00000368436 GMEB2Q9UKD1 530 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 GREB1Q4ZG55 1949 aa17.23■□□□□ 0.35
CKS1B-202ENST00000368436 ANAPC1Q9H1A4 1944 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 GOLGA8IPA6NC78 632 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 GOLGA8JA6NMD2 632 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 PRR5-ARHGAP8B1AHC4 643 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 CHURC1-FNTBB4DL54 471 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 HRO43593 1189 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 HUS1O60921 280 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
CKS1B-202ENST00000368436 CSH1P0DML2 217 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 CSH2P0DML3 217 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 HOXA6P31267 233 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 CNR2P34972 360 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 FNTBP49356 437 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 GPR15P49685 360 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 ARHGAP8P85298 464 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 LMNB2Q03252 620 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 INTS6LQ5JSJ4 861 aaKnown RBP17.22■□□□□ 0.35
CKS1B-202ENST00000368436 MON1AQ86VX9 555 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 CSGALNACT2Q8N6G5 542 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 MAB21L3Q8N8X9 362 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
CKS1B-202ENST00000368436 ZSCAN16Q9H4T2 348 aaPredicted RBP17.22■□□□□ 0.35
CKS1B-202ENST00000368436 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 C2orf42Q9NWW7 574 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 SIX4Q9UIU6 781 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 CCL26Q9Y258 94 aa17.22■□□□□ 0.35
CKS1B-202ENST00000368436 GABRDO14764 452 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.35
CKS1B-202ENST00000368436 NOL4O94818 638 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
CKS1B-202ENST00000368436 ACAT1P24752 427 aaKnown RBP17.21■□□□□ 0.35
CKS1B-202ENST00000368436 AVPR1AP37288 418 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
CKS1B-202ENST00000368436 RBP5P82980 135 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 MYL7Q01449 175 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 BFSP1Q12934 665 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 TXNDC8Q6A555 127 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 OSTM1Q86WC4 334 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 TRMT2BQ96GJ1 504 aaKnown RBP17.21■□□□□ 0.35
CKS1B-202ENST00000368436 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 MYRFLQ96LU7 910 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 KIF9Q9HAQ2 790 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 HPS4Q9NQG7 708 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 TDP1Q9NUW8 608 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 GTF3C4Q9UKN8 822 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 RALGAPA1Q6GYQ0 2036 aa17.21■□□□□ 0.35
CKS1B-202ENST00000368436 RETP07949 1114 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 CYP2F1P24903 491 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 LHX1P48742 406 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 ATXN1P54253 815 aaKnown RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 RPL10AP62906 217 aaKnown RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 RUNX3Q13761 415 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 ZNF268Q14587 947 aaPredicted RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 LPAL2Q16609 132 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 DDR2Q16832 855 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 SDHAF4Q5VUM1 108 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 DPH6Q7L8W6 267 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 LIMS2Q7Z4I7 341 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 PDILTQ8N807 584 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 STKLD1Q8NE28 680 aa17.2■□□□□ 0.34
CKS1B-202ENST00000368436 MRPS31Q92665 395 aaKnown RBP17.2■□□□□ 0.34
CKS1B-202ENST00000368436 CHFRQ96EP1 664 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms