RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 SGSM3Q96HU1 749 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 CFAP57Q96MR6 1250 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 AGAP1Q9UPQ3 857 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 UBOX5O94941 541 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 GCAP28676 217 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 PSMC1P62191 440 aaKnown RBP19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 XRCC4Q13426 336 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 MPZL3Q6UWV2 235 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 DPH6Q7L8W6 267 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 PARP9Q8IXQ6 854 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 TCP11Q8WWU5 503 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 SPATA33Q96N06 139 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 ZNF518BQ9C0D4 1074 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 GRM1Q13255 1194 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 FBXO16Q8IX29 292 aaPredicted RBP19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 ANKRD36BP1Q96IX9 119 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 FAM167AQ96KS9 214 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 CD48P09326 243 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 IQCF3P0C7M6 154 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 GDF10P55107 478 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 IGBP1P78318 339 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 DRICH1Q6PGQ1 229 aaPredicted RBP19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 ARHGEF18Q6ZSZ5 1173 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 FAM47EQ6ZV65 393 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 TBC1D1Q86TI0 1168 aaPredicted RBP19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 SYNCQ9H7C4 482 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 EURLQ9NYK6 297 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 SLC12A4Q9UP95 1085 aa19.06■□□□□ 0.64
UBQLN4-201ENST00000368309 SOCS7O14512 581 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 CST8O60676 142 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 DNAJC8O75937 253 aaPredicted RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 IBSPP21815 317 aaPredicted RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 FOXN2P32314 431 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 PDIA2Q13087 525 aaKnown RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 ACTL9Q8TC94 416 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 CCHCR1Q8TD31 782 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 THOC1Q96FV9 657 aaKnown RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 CPXM1Q96SM3 734 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 ELP3Q9H9T3 547 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 PCDHGC3Q9UN70 934 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 DRG1Q9Y295 367 aaKnown RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 CSADQ9Y600 493 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 LRCH4O75427 683 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 SUN1O94901 812 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 OAS1P00973 400 aaKnown RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 OTUD4Q01804 1114 aaKnown RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 Q3C1V9 767 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 EFCAB12Q6NXP0 572 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 TSHZ1Q6ZSZ6 1077 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 DHX37Q8IY37 1157 aaKnown RBP19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 PTPRHQ9HD43 1115 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 TXNRD2Q9NNW7 524 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 HMGXB4Q9UGU5 601 aa19.05■□□□□ 0.64
UBQLN4-201ENST00000368309 ACKR2O00590 384 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 KRT15P19012 456 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 WDR4P57081 412 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 TAF5Q15542 800 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 PKN2Q16513 984 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 CELF3Q5SZQ8 465 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 RNASEH2BQ5TBB1 312 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 SPATA21Q7Z572 469 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 C4orf33Q8N1A6 199 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 TWNKQ96RR1 684 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 DDX56Q9NY93 547 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 LTBP3Q9NS15 1303 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 C3orf70A6NLC5 250 aaPredicted RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 NFICP08651 508 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 COPS2P61201 443 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 MAF1Q9H063 256 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 SDCBP2Q9H190 292 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 ASCC2Q9H1I8 757 aaPredicted RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 SIX4Q9UIU6 781 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 IGKV6-21A0A0C4DH24 114 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 ADM5C9JUS6 153 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 PIK3R2O00459 728 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 CDH5P33151 784 aaPredicted RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 YWHAEP62258 255 aaKnown RBP19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 SURF1Q15526 300 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 CCDC63Q8NA47 563 aa19.04■□□□□ 0.64
UBQLN4-201ENST00000368309 NRLP54845 237 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 TAP1Q03518 808 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 MORF4L2Q15014 288 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 ZNF667Q5HYK9 610 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 MOB2Q70IA6 237 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 NKD2Q969F2 451 aaPredicted RBP19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 CLMNQ96JQ2 1002 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 CDT1Q9H211 546 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 SMYD3Q9H7B4 428 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 RPF1Q9H9Y2 349 aaKnown RBP19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 PDGFCQ9NRA1 345 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 METTL5Q9NRN9 209 aaKnown RBP19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 FAM47DPA6NHR8 397 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 SIGLEC16A6NMB1 481 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 GPR25O00155 361 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 ITGAVP06756 1048 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 PROZP22891 400 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 RAD23BP54727 409 aa19.03■□□□□ 0.64
UBQLN4-201ENST00000368309 SLC25A11Q02978 314 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms