RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ITPR1Q14643 2758 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 DMXL2Q8TDJ6 3036 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 TISP43B9A030 160 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 HNRNPDLO14979 420 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 EPHB6O15197 1021 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 NCAM2O15394 837 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 NOL4O94818 638 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 TUBB4AP04350 444 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 ALDH2P05091 517 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 FSHRP23945 695 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 FMO5P49326 533 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 VAMP7P51809 220 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 NRLP54845 237 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 POU5F1BQ06416 359 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 LAMTOR4Q0VGL1 99 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 TFDP1Q14186 410 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 TCERG1LQ5VWI1 586 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 SLFN12LQ6IEE8 588 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 DPY19L2P1Q6NXN4 242 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 POTEHQ6S545 545 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 ZPBP2Q6X784 338 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 PRR23CQ6ZRP0 262 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 MTSS1LQ765P7 747 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 URGCPQ8TCY9 931 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 SYN2Q92777 582 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 FAM193BQ96PV7 902 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 TMEM175Q9BSA9 504 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 NFKBIZQ9BYH8 718 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 PRKD2Q9BZL6 878 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 GANQ9H2C0 597 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 SEMA4GQ9NTN9 838 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 FAM105AQ9NUU6 356 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 ZDHHC7Q9NXF8 308 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 SUCLA2Q9P2R7 463 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
CSNK1E-202ENST00000366216 A0A087WZ62 844 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 SOWAHDA6NJG2 315 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 ZNF623O75123 536 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 PROS1P07225 676 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 RETP07949 1114 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 TDGF1P13385 188 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 PON1P27169 355 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 GLUD2P49448 558 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 LIG4P49917 911 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 RAB27AP51159 221 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 NTHL1P78549 312 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 PFKPQ01813 784 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 MTAPQ13126 283 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 FZD5Q13467 585 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CSRP2Q16527 193 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 SNRNP35Q16560 246 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 N4BP2L1Q5TBK1 243 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 WDR59Q6PJI9 974 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 RAD9BQ6WBX8 426 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 USP37Q86T82 979 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 ZBTB8OSQ8IWT0 167 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CCDC170Q8IYT3 715 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 GPD1LQ8N335 351 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CELF5Q8N6W0 485 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 TMC2Q8TDI7 906 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 COL26A1Q96A83 441 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 BICD1Q96G01 975 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 B3GALT6Q96L58 329 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 NELL2Q99435 816 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 FDXACB1Q9BRP7 624 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 GCOM2Q9BZD3 368 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CCDC113Q9H0I3 377 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 RXFP1Q9HBX9 757 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 CDH7Q9ULB5 785 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 MYO6Q9UM54 1294 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 PPP2R2CQ9Y2T4 447 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 ATG2BQ96BY7 2078 aa12.07□□□□□ -0.48
CSNK1E-202ENST00000366216 NRP1O14786 923 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 EXTL3O43909 919 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 GDF9O60383 454 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 LDHAP00338 332 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 C1RP00736 705 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 CCDC175P0C221 793 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 TARSP26639 723 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 GTF2H1P32780 548 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 UBXN11Q5T124 520 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 KLHDC7AQ5VTJ3 777 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 PRR23BQ6ZRT6 265 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 TPRG1Q6ZUI0 275 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 TOGARAM2Q6ZUX3 1019 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 RRAGAQ7L523 313 aa12.06□□□□□ -0.48
CSNK1E-202ENST00000366216 PALB2Q86YC2 1186 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms