RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ANKRD13AQ8IZ07 590 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 BOLLQ8N9W6 283 aaKnown RBP5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 FAM98AQ8NCA5 519 aaKnown RBP5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 NTN5Q8WTR8 489 aaPredicted RBP5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 FAM136AQ96C01 138 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 RUNDC1Q96C34 613 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 ATP6V0A4Q9HBG4 840 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 KLC4Q9NSK0 619 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 XPR1Q9UBH6 696 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 DDX20Q9UHI6 824 aaKnown RBP5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 WDR27A2RRH5 827 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 LRRC3CA6NJW4 275 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 A6NNZ2 444 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 hCG_1984214I3L0E3 225 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 IGLV2-14P01704 120 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 IL12RB1P42701 662 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 CACNA2D1P54289 1103 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 ITIH3Q06033 890 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 MLC1Q15049 377 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 TBCCQ15814 346 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 ANO6Q4KMQ2 910 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 AMOTQ4VCS5 1084 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 ARHGAP29Q52LW3 1261 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 AKNAD1Q5T1N1 836 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 TSTD2Q5T7W7 516 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 CXorf57Q6NSI4 855 aaKnown RBP5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 ZNF280BQ86YH2 543 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 SLC15A4Q8N697 577 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 RFKQ969G6 155 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 OSBPL9Q96SU4 736 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 CNNM1Q9NRU3 951 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 TCEAL9Q9UHQ7 104 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 SERTAD3Q9UJW9 196 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 MRPS17Q9Y2R5 130 aaKnown RBP5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 PLEKHM1Q9Y4G2 1056 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 USP19O94966 1318 aa5.71□□□□□ -1.5
RNU4-28P-201ENST00000364739 A0A1W2PPL8 197 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 TMEM233B4DJY2 109 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 TSPAN6O43657 245 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 C1QL1O75973 258 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 SLC11A2P49281 568 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 AGFG1P52594 562 aaKnown RBP5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 NXPH1P58417 271 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 CTBP1Q13363 440 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 IQCB1Q15051 598 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 MINDY4Q4G0A6 757 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 ARHGAP40Q5TG30 622 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 DPY19L2P1Q6NXN4 242 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 LAYNQ6UX15 382 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 C14orf80Q86SX3 495 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 MAGEB6Q8N7X4 407 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 FKBP10Q96AY3 582 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 SPATA5L1Q9BVQ7 753 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 CPNE5Q9HCH3 593 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 PIH1D1Q9NWS0 290 aaKnown RBP5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 TBC1D30Q9Y2I9 924 aa5.7□□□□□ -1.5
RNU4-28P-201ENST00000364739 BTN3A1O00481 513 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 PXNP49023 591 aaPredicted RBP5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 RASAL3Q86YV0 1011 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 TCEAL8Q8IYN2 117 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 FAM109AQ8N4B1 249 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 DNAJC5GQ8N7S2 189 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 IL31RAQ8NI17 732 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 ZNF384Q8TF68 577 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 SEMA4GQ9NTN9 838 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 PTGFRNQ9P2B2 879 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 SSX2IPQ9Y2D8 614 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 MED16Q9Y2X0 877 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 TMX2Q9Y320 296 aa5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.69□□□□□ -1.5
RNU4-28P-201ENST00000364739 PPM1GO15355 546 aaPredicted RBP5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 SOAT2O75908 522 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 NBPF8Q3BBV2 869 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 RGS7BPQ6MZT1 257 aaPredicted RBP5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 MAEAQ7L5Y9 396 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 MAVSQ7Z434 540 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 AMIGO2Q86SJ2 522 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 PRIMA1Q86XR5 153 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 MYO1HQ8N1T3 1032 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 MPP5Q8N3R9 675 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 RAPGEF4Q8WZA2 1011 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 TRIM54Q9BYV2 358 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 KLHL42Q9P2K6 505 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 SLC17A6Q9P2U8 582 aa5.68□□□□□ -1.5
RNU4-28P-201ENST00000364739 FER1L4A9Z1Z3 1794 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 CFAP69A5D8W1 941 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 CAPN8A6NHC0 703 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 MYO1CO00159 1063 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 ATXN1LP0C7T5 689 aaKnown RBP5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 JUPP14923 745 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 ZFXP17010 805 aaPredicted RBP5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 SLC7A1P30825 629 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 LIPAP38571 399 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 CLCN2P51788 898 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 ARFIP2P53365 341 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 ZIK1Q3SY52 487 aaPredicted RBP5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 ICE2Q659A1 982 aa5.67□□□□□ -1.5
RNU4-28P-201ENST00000364739 NXNQ6DKJ4 435 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms