RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 C11orf63Q6NUN7 778 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 LVRNQ6Q4G3 990 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 CCDC81Q6ZN84 652 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 AGMOQ6ZNB7 445 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SLC35G2Q8TBE7 412 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SLC26A7Q8TE54 656 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 RPGRQ92834 1020 aaKnown RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 TAMM41Q96BW9 452 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 TMA16Q96EY4 203 aaKnown RBP12.13□□□□□ -0.47
CNOT4-203ENST00000361528 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■□□ 18.6
CNOT4-203ENST00000361528 TSSK1BQ9BXA7 367 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SOX13Q9UN79 622 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 EXOC7Q9UPT5 735 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 SORCS3Q9UPU3 1222 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 DNAJC16Q9Y2G8 782 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 INPP5FQ9Y2H2 1132 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
CNOT4-203ENST00000361528 GNPATO15228 680 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 BMP10O95393 424 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 CRYZL1O95825 349 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 M6PRP20645 277 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 CIITAP33076 1130 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 CHKAP35790 457 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 GALCP54803 685 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-203ENST00000361528 CHRNEQ04844 493 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 EFTUD2Q15029 972 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNOT4-203ENST00000361528 SHROOM1Q2M3G4 852 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-203ENST00000361528 TRIM16LQ309B1 348 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 HEATR4Q86WZ0 1026 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 TRIM59Q8IWR1 403 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 CMTR1Q8N1G2 835 aaKnown RBP12.12□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF420Q8TAQ5 688 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-203ENST00000361528 TBC1D15Q8TC07 691 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 MYD88Q99836 296 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 MANSC1Q9H8J5 431 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 ARMC1Q9NVT9 282 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 APPL1Q9UKG1 709 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
CNOT4-203ENST00000361528 CAPN8A6NHC0 703 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 EYA2O00167 538 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CCDC130P13994 396 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 PLCG1P19174 1290 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CALML3P27482 149 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ETV3P41162 512 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ESRRGP62508 458 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CCNIQ14094 377 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 C15orf59Q2T9L4 293 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 RFPL4BQ6ZWI9 263 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 MYO1HQ8N1T3 1032 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 GSTCDQ8NEC7 633 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ALG3Q92685 438 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 TCF12Q99081 682 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 C2orf49Q9BVC5 232 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 NUP85Q9BW27 656 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 SLC2A11Q9BYW1 496 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 INO80BQ9C086 356 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 GPRC5DQ9NZD1 345 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 DSEQ9UL01 958 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CCDC88AQ3V6T2 1871 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 A0A1W2PQ67 120 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 SYCE1LA8MT33 242 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 AREL1O15033 823 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 UFL1O94874 794 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ABCB1P08183 1280 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CALM1P0DP23 149 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CALM2P0DP24 149 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 CALM3P0DP25 149 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 RCVRNP35243 200 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 KPNA1P52294 538 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 PTK6Q13882 451 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 OXA1LQ15070 435 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 TIGD2Q4W5G0 525 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 AGAP7PQ5VUJ5 663 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ITPRIPL1Q6GPH6 555 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 IYDQ6PHW0 289 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 USP43Q70EL4 1123 aa12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
CNOT4-203ENST00000361528 ADCY4Q8NFM4 1077 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms