RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SUN2Q9UH99 717 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 AMACRQ9UHK6 382 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 GTF3C4Q9UKN8 822 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 NME7Q9Y5B8 376 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SNX9Q9Y5X1 595 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CDY2AQ9Y6F7 541 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 NRG2O14511 850 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SPTLC1O15269 473 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CAND2O75155 1236 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 GRAP2O75791 330 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CHRNA1P02708 482 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CYP1A1P04798 512 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PDGFRBP09619 1106 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 IMPDH2P12268 514 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CYP3A5P20815 502 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RDXP35241 583 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 THPOP40225 353 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CARSP49589 748 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RGS7P49802 495 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 NDST1P52848 882 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 GYS2P54840 703 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TAS2R40P59535 323 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PPARDQ03181 441 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 CENPCQ03188 943 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 POU5F1BQ06416 359 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PTP4A2Q12974 167 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TMED1Q13445 227 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 MAMLD1Q13495 774 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RAB6CQ53S08 254 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 UBXN11Q5T124 520 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 NOTUMQ6P988 496 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TRIM74Q86UV6 250 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TRIM73Q86UV7 250 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RHOT2Q8IXI1 618 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SYCE1Q8N0S2 351 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 EMC1Q8N766 993 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 SNX27Q96L92 541 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 MCEEQ96PE7 176 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 TRIM51Q9BSJ1 452 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 HEMGNQ9BXL5 484 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 FUT8Q9BYC5 575 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RAB6CQ9H0N0 254 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 DPEP3Q9H4B8 488 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 AGO3Q9H9G7 860 aaKnown RBP5.39□□□□□ -1.55
ATXN3-202ENST00000359366 EPB41L5Q9HCM4 733 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 IRAK4Q9NWZ3 460 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
ATXN3-202ENST00000359366 PI4K2BG5E9Z4 385 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PGRMC1O00264 195 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 POLR3GO15318 223 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 TTI1O43156 1089 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 SEPT4O43236 478 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 HEXIM1O94992 359 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 FAM153BP0C7A2 387 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 GHRP10912 638 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 GRM5P41594 1212 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PLA2G4AP47712 749 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 GJA9P57773 515 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PSMC1P62191 440 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 OGDHQ02218 1023 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 NOGQ13253 232 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 SNX1Q13596 522 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 SURF1Q15526 300 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 FAM153CQ494X1 144 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PTPN20Q4JDL3 420 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PAN2Q504Q3 1202 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 TXNRD3NBQ6F5E7 133 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 ACOT1Q86TX2 421 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 MMGT1Q8N4V1 131 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 SMG8Q8ND04 991 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 CASKIN2Q8WXE0 1202 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 ATG4AQ8WYN0 398 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PIK3R5Q8WYR1 880 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 MIEF2Q96C03 454 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 C18orf8Q96DM3 657 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 PIWIL1Q96J94 861 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 CPXM1Q96SM3 734 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 MTG1Q9BT17 334 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 DPH5Q9H2P9 285 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 FAM153AQ9UHL3 310 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 GTF2IRD1Q9UHL9 959 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 ST3GAL5Q9UNP4 418 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 CNTN6Q9UQ52 1028 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 RRP15Q9Y3B9 282 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 IPPQ9Y573 584 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 KIAA0100Q14667 2235 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 SMIM28A0A1B0GU29 152 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 CCDC151A5D8V7 595 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 F8VP50 259 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 I3L4J1 428 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 M0QYV0 167 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 SART1O43290 800 aaKnown RBP5.38□□□□□ -1.55
ATXN3-202ENST00000359366 ADAMTS4O75173 837 aa5.38□□□□□ -1.55
ATXN3-202ENST00000359366 TOMM70O94826 608 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms