RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PIAS1O75925 651 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 RFC1P35251 1148 aaPredicted RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 HADHBP55084 474 aaKnown RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 RBP5P82980 135 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ROR1Q01973 937 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 CCDC6Q16204 474 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ZDHHC24Q6UX98 284 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ATP11CQ8NB49 1132 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 TTC17Q96AE7 1141 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 OPTNQ96CV9 577 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 DHX35Q9H5Z1 703 aaKnown RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.76□□□□□ -0.53
SSU72-202ENST00000359060 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 IL18RAPO95256 599 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 VNN1O95497 513 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ASS1P00966 412 aaKnown RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 NUDT17P0C025 328 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 IRX4P78413 519 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 KIZQ2M2Z5 673 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 FAXCQ5TGI0 409 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 CCDC33Q8N5R6 958 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 PPM1NQ8N819 430 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 ACO2Q99798 780 aaKnown RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 WDR35Q9P2L0 1181 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 AFG3L2Q9Y4W6 797 aa11.76□□□□□ -0.53
SSU72-202ENST00000359060 MAFBQ9Y5Q3 323 aaPredicted RBP11.76□□□□□ -0.53
SSU72-202ENST00000359060 CCT8L1PA6NM43 557 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 DYNC1LI2O43237 492 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 USP2O75604 605 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 CPP00450 1065 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 GH1P01241 217 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 PECAM1P16284 738 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 PTK6Q13882 451 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 REPS2Q8NFH8 660 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 RAB6BQ9NRW1 208 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 KLC4Q9NSK0 619 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 ZDHHC18Q9NUE0 388 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 GPATCH2LQ9NWQ4 482 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 USP15Q9Y4E8 981 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 STK10O94804 968 aaKnown RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 UNGP13051 313 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 ARL2P36404 184 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 HIRAP54198 1017 aaPredicted RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 TAS1R3Q7RTX0 852 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 PCGF5Q86SE9 256 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 KATNAL2Q8IYT4 538 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 NT5C1AQ9BXI3 368 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 PTPRJQ12913 1337 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 FAM47DPA6NHR8 397 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 LACTBL1A8MY62 500 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 KCNN4O15554 427 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 NFICP08651 508 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 LCP1P13796 627 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 ECHS1P30084 290 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 DNAJC3Q13217 504 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 TRPM8Q7Z2W7 1104 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 ACOT1Q86TX2 421 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 SMYD3Q9H7B4 428 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 XPO7Q9UIA9 1087 aaKnown RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 GOLGB1Q14789 3259 aaKnown RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 I3L4J1 428 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 MAGEB2O15479 319 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 APRTP07741 180 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 HNRNPH1P31943 449 aaKnown RBP11.75□□□□□ -0.53
SSU72-202ENST00000359060 ICE2Q659A1 982 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 MON1BQ7L1V2 547 aa11.75□□□□□ -0.53
SSU72-202ENST00000359060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSU72-202ENST00000359060 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 MTA2O94776 668 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 CELF3Q5SZQ8 465 aaKnown RBP11.74□□□□□ -0.53
SSU72-202ENST00000359060 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 ZNF354CQ86Y25 554 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 PHF13Q86YI8 300 aaPredicted RBP11.74□□□□□ -0.53
SSU72-202ENST00000359060 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 ZNF518BQ9C0D4 1074 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 LRRC4Q9HBW1 653 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 SLC5A4Q9NY91 659 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 COL2A1P02458 1487 aaPredicted RBP11.74□□□□□ -0.53
SSU72-202ENST00000359060 ATP8B3O60423 1300 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 A0A0G2JND7 137 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 NPTXRO95502 500 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 MMP8P22894 467 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 ARL4AP40617 200 aa11.74□□□□□ -0.53
SSU72-202ENST00000359060 VCPP55072 806 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms