RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CCNG2Q16589 344 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 C16orf87Q6PH81 154 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 KIRREL3Q8IZU9 778 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 GALNT4Q8N4A0 578 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 EMC1Q8N766 993 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 STX18Q9P2W9 335 aaKnown RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 ANGPT2O15123 496 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 GARTP22102 1010 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 KCNA1Q09470 495 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 C11orf63Q6NUN7 778 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 TMC2Q8TDI7 906 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.31□□□□□ -0.12
VCP-201ENST00000358901 ZBTB39O15060 712 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 DYNC1LI2O43237 492 aaPredicted RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 KLRC4O43908 158 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 MYBL2P10244 700 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 MYL2P10916 166 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 VHLP40337 213 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 SOX10P56693 466 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 CATSPER1Q8NEC5 780 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 PABPC5Q96DU9 382 aaKnown RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 FRMD8Q9BZ67 464 aaPredicted RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 RIPK2O43353 540 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 ZC3H11AO75152 810 aaKnown RBP eCLIP14.3□□□□□ -0.12
VCP-201ENST00000358901 SLITRK3O94933 977 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 RARAP10276 462 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 RARRES1P49788 294 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
VCP-201ENST00000358901 GOLGA7BQ2TAP0 167 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 SAMD7Q7Z3H4 446 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 PPHLN1Q8NEY8 458 aaKnown RBP14.3□□□□□ -0.12
VCP-201ENST00000358901 EXD1Q8NHP7 514 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 SGF29Q96ES7 293 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 PAFAH2Q99487 392 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 KDM4CQ9H3R0 1056 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 SLC39A10Q9ULF5 831 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 TMX2Q9Y320 296 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 PCDHGC5Q9Y5F6 944 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 CDY2AQ9Y6F7 541 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 CDY1Q9Y6F8 540 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 GYS1P13807 737 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 SOX11P35716 441 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 MYBPC2Q14324 1141 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 TCF7P36402 384 aaPredicted RBP14.3□□□□□ -0.12
VCP-201ENST00000358901 PTGER2P43116 358 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 CYP24A1Q07973 514 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 C6orf10Q5SRN2 563 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 TAS2R42Q7RTR8 314 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
VCP-201ENST00000358901 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
VCP-201ENST00000358901 GDF3Q9NR23 364 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 RPS6KL1Q9Y6S9 549 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 ITSN1Q15811 1721 aa14.3□□□□□ -0.12
VCP-201ENST00000358901 NUP93Q8N1F7 819 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 OR6J1Q8NGC5 347 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 SH3GL3Q99963 347 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ARHGEF38Q9NXL2 777 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 EML1O00423 815 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 AKAP10O43572 662 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 HBP1O60381 514 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 PACS2Q86VP3 889 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ASAP3Q8TDY4 903 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 SNX19Q92543 992 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 PBXIP1Q96AQ6 731 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 NDFIP2Q9NV92 336 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 POLIQ9UNA4 740 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 MCL1Q07820 350 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 PCSK7Q16549 785 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 LAYNQ6UX15 382 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 FASTKD5Q7L8L6 764 aaKnown RBP14.29□□□□□ -0.12
VCP-201ENST00000358901 ARHGEF19Q8IW93 802 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ATPAF2Q8N5M1 289 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 IPMKQ8NFU5 416 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 KRT35Q92764 455 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ELMO2Q96JJ3 720 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 MTMR9Q96QG7 549 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 MYOZ2Q9NPC6 264 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 GPATCH2LQ9NWQ4 482 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ERAP1Q9NZ08 941 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 O00370 1275 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 COPAP53621 1224 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 MYL6P60660 151 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 LBRQ14739 615 aaKnown RBP14.29□□□□□ -0.12
VCP-201ENST00000358901 CLEC16AQ2KHT3 1053 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 PCNX4Q63HM2 1172 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 SPOCD1Q6ZMY3 1216 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 SCFD2Q8WU76 684 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 ZC3H15Q8WU90 426 aaKnown RBP14.29□□□□□ -0.12
VCP-201ENST00000358901 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 CISHQ9NSE2 258 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 GGA3Q9NZ52 723 aa14.29□□□□□ -0.12
VCP-201ENST00000358901 WNT7AO00755 349 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 SYF2O95926 243 aaKnown RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms