RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 FAM49AQ9H0Q0 323 aaPredicted RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 TUT1Q9H6E5 874 aaKnown RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 PRMT7Q9NVM4 692 aaPredicted RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 PIK3R2O00459 728 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 KIF3CO14782 793 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 ADCY6O43306 1168 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 SMPD1P17405 629 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 MAGOHP61326 146 aaKnown RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 SURF1Q15526 300 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 ZKSCAN8Q15776 578 aaPredicted RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 PRAMEF19Q5SWL8 479 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 ERICH1Q86X53 443 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 KIAA0319LQ8IZA0 1049 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 OSBPL8Q9BZF1 889 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 CAND2O75155 1236 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 ATP6V1G2O95670 118 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 XRCC4Q13426 336 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 KIZQ2M2Z5 673 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 PTPN20Q4JDL3 420 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 GKAP1Q5VSY0 366 aaPredicted RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 DENND2CQ68D51 928 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 GPR142Q7Z601 462 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 ARMC2Q8NEN0 867 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 RAPGEF5Q92565 580 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 KIF9Q9HAQ2 790 aa16.9■□□□□ 0.3
PTPN5-201ENST00000358540 MTRF1LQ9UGC7 380 aaKnown RBP16.9■□□□□ 0.3
PTPN5-201ENST00000358540 MGRN1O60291 552 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 KRT1P04264 644 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 CETPP11597 493 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 CDC25CP30307 473 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 POLR2BP30876 1174 aaKnown RBP16.89■□□□□ 0.29
PTPN5-201ENST00000358540 CHKAP35790 457 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 ELF3P78545 371 aaPredicted RBP16.89■□□□□ 0.29
PTPN5-201ENST00000358540 C12orf50Q8NA57 414 aaPredicted RBP16.89■□□□□ 0.29
PTPN5-201ENST00000358540 PPTC7Q8NI37 304 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 VCPIP1Q96JH7 1222 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 TMEM191CA6NGB0 347 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 DRG2P55039 364 aaKnown RBP16.89■□□□□ 0.29
PTPN5-201ENST00000358540 CALCOCO2Q13137 446 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 EMC1Q8N766 993 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 DDX23Q9BUQ8 820 aaKnown RBP16.89■□□□□ 0.29
PTPN5-201ENST00000358540 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 PABPC3Q9H361 631 aaKnown RBP16.89■□□□□ 0.29
PTPN5-201ENST00000358540 SETD4Q9NVD3 440 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 MGAMO43451 1857 aa16.89■□□□□ 0.29
PTPN5-201ENST00000358540 PSTPIP1O43586 416 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
PTPN5-201ENST00000358540 SMTNL2Q2TAL5 461 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 MFSD7Q6UXD7 560 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 VTA1Q9NP79 307 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 IP6K2Q9UHH9 426 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 SLC12A6Q9UHW9 1150 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 L3MBTL1Q9Y468 752 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 ASAP2O43150 1006 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 CALB1P05937 261 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 JOSD2Q8TAC2 188 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 ART4Q93070 314 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
PTPN5-201ENST00000358540 EME2A4GXA9 379 aaPredicted RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 SRRM3A6NNA2 597 aaPredicted RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 TP73O15350 636 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 ACSL3O95573 720 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 KLF1Q13351 362 aaPredicted RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 GRIK4Q16099 956 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 EPS8L3Q8TE67 593 aaKnown RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 ZNF483Q8TF39 744 aaPredicted RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 ELOVL4Q9GZR5 314 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 RFC1P35251 1148 aaPredicted RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 ADCY8P40145 1251 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 RAD23BP54727 409 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 NFX1Q12986 1120 aaKnown RBP16.87■□□□□ 0.29
PTPN5-201ENST00000358540 KCNT1Q5JUK3 1230 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 KATNAL2Q8IYT4 538 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 PTPN18Q99952 460 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 SYNCQ9H7C4 482 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 ZWILCHQ9H900 591 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 IQCA1LA6NCM1 817 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 GTF2A2P52657 109 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 ITGA8P53708 1063 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 SLC8A3P57103 927 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 GRIK3Q13003 919 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 LINC01465Q8N7H1 131 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 UBA3Q8TBC4 463 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 MDM1Q8TC05 714 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 CCT6BQ92526 530 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 MAML3Q96JK9 1138 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 CPXM1Q96SM3 734 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 HES2Q9Y543 173 aa16.87■□□□□ 0.29
PTPN5-201ENST00000358540 TCRBV5S1A1TA0A578 114 aa16.86■□□□□ 0.29
PTPN5-201ENST00000358540 LRRD1A4D1F6 860 aa16.86■□□□□ 0.29
PTPN5-201ENST00000358540 TSPAN1O60635 241 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms