RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SH3BP4Q9P0V3 963 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 STAP2Q9UGK3 403 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ATP6V1HQ9UI12 483 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PADI4Q9UM07 663 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 SNX5Q9Y5X3 404 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 URODP06132 367 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PLEKP08567 350 aaPredicted RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 HPGDP15428 266 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CCDC142Q17RM4 750 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 DEFB115Q30KQ5 88 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 AADACL2Q6P093 401 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 GET4Q7L5D6 327 aaPredicted RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 POLNQ7Z5Q5 900 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 KIF2BQ8N4N8 673 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 NT5C1AQ9BXI3 368 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ECT2Q9H8V3 914 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 EPB41L4AQ9HCS5 686 aaPredicted RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PLK1P53350 603 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 NCALDP61601 193 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ZNF543Q08ER8 600 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GRM4Q14833 912 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SCG3Q8WXD2 468 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MRPS31Q92665 395 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ZNF669Q96BR6 464 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 VPS50Q96JG6 964 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 THUMPD3Q9BV44 507 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 RNF14Q9UBS8 474 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 KPNA7A9QM74 516 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MED24O75448 989 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 CTSEP14091 401 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SERPINB5P36952 375 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SERPINB4P48594 390 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MAP3K10Q02779 954 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PATL1Q86TB9 770 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 DDX50Q9BQ39 737 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 CINPQ9BW66 212 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MROH8Q9H579 483 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SELENONQ9NZV5 590 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 USP6P35125 1406 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 TSC22D2O75157 780 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PYGLP06737 847 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MAP2K2P36507 400 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SCIMPQ6UWF3 145 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 C7orf57Q8NEG2 295 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PIK3R5Q8WYR1 880 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 THAP2Q9H0W7 228 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 NEUROD4Q9HD90 331 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GULP1Q9UBP9 304 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ZFYVE9O95405 1425 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PIRTP0C851 137 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 CCDC130P13994 396 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ALOX15P16050 662 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ARMCX6Q7L4S7 300 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 RAB42Q8N4Z0 105 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 CYGBQ8WWM9 190 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 LENG1Q96BZ8 264 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 FOPNLQ96NB1 174 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ACOX2Q99424 681 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 NT5MQ9NPB1 228 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 AASDHPPTQ9NRN7 309 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 BLMP54132 1417 aaPredicted RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GOLGA8QA0A0J9YX86 632 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GOLGA8OA6NCC3 632 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GOLGA8NF8WBI6 632 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 MFAP3LO75121 409 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 EYA4O95677 639 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 OR4Q2P0C623 313 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 IL1R1P14778 569 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 FXR1P51114 621 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ESRRGP62508 458 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 BOP1Q14137 746 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 POU6F1Q14863 301 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ATG9AQ7Z3C6 839 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 RASAL3Q86YV0 1011 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 LEMD2Q8NC56 503 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 TRPC4APQ8TEL6 797 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SCFD1Q8WVM8 642 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 BCL2L14Q9BZR8 327 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 IL25Q9H293 177 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 Q9H521 79 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 TCP11X1B4DZS4 312 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 RHOCP08134 193 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 FAM200BP0CF97 657 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ATP6V1C1P21283 382 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 GATAD2AQ86YP4 633 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ATP6V1C2Q8NEY4 427 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 FBXO41Q8TF61 875 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PMEPA1Q969W9 287 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ADAM2Q99965 735 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 CENPKQ9BS16 269 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 VPS28Q9UK41 221 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 A0A087X0T9 212 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 HBP1O60381 514 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 PCP11498 1178 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 STIP1P31948 543 aaKnown RBP7.66□□□□□ -1.18
VPS13A-202ENST00000357409 ACOX1Q15067 660 aa7.66□□□□□ -1.18
VPS13A-202ENST00000357409 SHROOM1Q2M3G4 852 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms