RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 FZD8Q9H461 694 aa13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■■ 89.4
RTFDC1-202ENST00000357348 STARD7Q9NQZ5 370 aa13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 HOMER3Q9NSC5 361 aa13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 APEX2Q9UBZ4 518 aa13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 PRKAG3Q9UGI9 489 aa13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 AGO2Q9UKV8 859 aaKnown RBP13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 NOD1Q9Y239 953 aa13.42□□□□□ -0.26
RTFDC1-202ENST00000357348 ACKR2O00590 384 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 ANP32DO95626 131 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 CLTAP09496 248 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 CCND1P24385 295 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 TNFSF9P41273 254 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 CCNG1P51959 295 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 SIX1Q15475 284 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 FAM133BQ5BKY9 247 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 ATF7IP2Q5U623 682 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 LMBRD2Q68DH5 695 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 ASRGL1Q7L266 308 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 PALB2Q86YC2 1186 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 THNSL1Q8IYQ7 743 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 UBL4BQ8N7F7 174 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 PLEKHO2Q8TD55 490 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 SLCO2A1Q92959 643 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 SERPINB12Q96P63 405 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 INTS2Q9H0H0 1204 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 ADAMTS10Q9H324 1103 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 NOP53Q9NZM5 478 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 DLATP10515 647 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 COILP38432 576 aaPredicted RBP13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 KCNJ2P63252 427 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 LMNB2Q03252 620 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 CBWD3Q5JTY5 395 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 VSTM1Q6UX27 236 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 KRT35Q92764 455 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 TBC1D31Q96DN5 1066 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 FAM212AQ96EL1 285 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 AGPAT1Q99943 283 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
RTFDC1-202ENST00000357348 SUN1O94901 812 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 KRT13P13646 458 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 ARF4P18085 180 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 HOXC8P31273 242 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 THPOP40225 353 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 SKIV2L2P42285 1042 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 WNT7BP56706 349 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 COPS2P61201 443 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 BFSP1Q12934 665 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 AADACL2Q6P093 401 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 CTU1Q7Z7A3 348 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 CKAP2Q8WWK9 683 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 GCOM2Q9BZD3 368 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 WNT8AQ9H1J5 351 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 ECT2Q9H8V3 914 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 TOPORSQ9NS56 1045 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 PRMT7Q9NVM4 692 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 MOXD2PA6NHM9 499 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 TP73O15350 636 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 TOM1L1O75674 476 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 TCEA3O75764 348 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 WFS1O76024 890 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 RPSAP08865 295 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 GARTP22102 1010 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 PAX7P23759 505 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 ABCD1P33897 745 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 AMHR2Q16671 573 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 RHBDF2Q6PJF5 856 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 ELMO3Q96BJ8 720 aa13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 TRIM6Q9C030 488 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-202ENST00000357348 A0A0B4J269 797 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 TSPAN1O60635 241 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 LRRN2O75325 713 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 GCLMP48507 274 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 VAMP7P51809 220 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 MYL7Q01449 175 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SLFN12LQ6IEE8 588 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 ZPBP2Q6X784 338 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 ZNF410Q86VK4 478 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 RXFP1Q9HBX9 757 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms