RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 ITGB1P05556 798 aa27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 PTP4A2Q12974 167 aa27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 LIN9Q5TKA1 542 aa27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 METTL23Q86XA0 190 aa27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 DDX43Q9NXZ2 648 aaKnown RBP27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 UVRAGQ9P2Y5 699 aa27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 JRKLQ9Y4A0 524 aa27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 TIMM13Q9Y5L4 95 aaPredicted RBP27.39■■□□□ 1.98
TNFRSF25-204ENST00000356876 GRID2IPA4D2P6 1211 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 I3L4J1 428 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 UPP2O95045 317 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 GPD2P43304 727 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 MMS22LQ6ZRQ5 1243 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 ERICH1Q86X53 443 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 B3GALNT2Q8NCR0 500 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 TOP1MTQ969P6 601 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 C11orf70Q9BRQ4 267 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 FAM49BQ9NUQ9 324 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 PRKAG2Q9UGJ0 569 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 COG5Q9UP83 839 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 F8W810 466 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 ATMINO43313 823 aaPredicted RBP27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 MTA2O94776 668 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 AMHP03971 560 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 ALDH2P05091 517 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 CALB1P05937 261 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 GOLGA7BQ2TAP0 167 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 IL23AQ9NPF7 189 aa27.38■■□□□ 1.97
TNFRSF25-204ENST00000356876 MICAL3Q7RTP6 2002 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 TRAPPC3O43617 180 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 DGKIO75912 1065 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 PTPN1P18031 435 aaKnown RBP27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 TYMPP19971 482 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 RRM1P23921 792 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 LRRC43Q8N309 656 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 LRRC57Q8N9N7 239 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 LPIN3Q9BQK8 851 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 TMEM175Q9BSA9 504 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 NUP85Q9BW27 656 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 HESX1Q9UBX0 185 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 CYTH4Q9UIA0 394 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 PCDHB8Q9UN66 801 aa27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 PRG3Q9Y2Y8 225 aaPredicted RBP27.37■■□□□ 1.97
TNFRSF25-204ENST00000356876 NRP1O14786 923 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 BAIAP3O94812 1187 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 PCSK1P29120 753 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 PKDCCQ504Y2 493 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 UBA3Q8TBC4 463 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 COLEC11Q9BWP8 271 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 CHORDC1Q9UHD1 332 aaPredicted RBP27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 CDH9Q9ULB4 789 aa27.36■■□□□ 1.97
TNFRSF25-204ENST00000356876 TADA2AO75478 443 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 ACRP10323 421 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 ACAT1P24752 427 aaKnown RBP27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 C2CD6Q53TS8 623 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 SLFN11Q7Z7L1 901 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 SYCE1Q8N0S2 351 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 MSANTD4Q8NCY6 345 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 FAN1Q9Y2M0 1017 aa27.35■■□□□ 1.97
TNFRSF25-204ENST00000356876 ENC1O14682 589 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 ATP2C2O75185 946 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 URI1O94763 535 aaPredicted RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 WDR5P61964 334 aaKnown RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 PSMC1P62191 440 aaKnown RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 KIAA0319Q5VV43 1072 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 PLEKHA7Q6IQ23 1121 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 TTC30AQ86WT1 665 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 ANKRD52Q8NB46 1076 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 ZNF564Q8TBZ8 553 aaPredicted RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 HNRNPABQ99729 332 aaKnown RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 SYT15Q9BQS2 421 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 ACBD6Q9BR61 282 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 STRIP2Q9ULQ0 834 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 ATP1A1P05023 1023 aaKnown RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 SETSIPP0DME0 302 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 CCDC130P13994 396 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 SLC11A1P49279 550 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 PPIGQ13427 754 aaKnown RBP eCLIP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 PTPN20Q4JDL3 420 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 PAPD7Q5XG87 772 aaKnown RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 OVOS1Q6IE37 1185 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 RTP3Q9BQQ7 232 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 MRPL47Q9HD33 250 aaKnown RBP27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 PARVAQ9NVD7 372 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 ADAM28Q9UKQ2 775 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 SCINQ9Y6U3 715 aa27.34■■□□□ 1.97
TNFRSF25-204ENST00000356876 BUB1BO60566 1050 aaPredicted RBP27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 GALTP07902 379 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 PDCLQ13371 301 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 DAAM2Q86T65 1068 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 THEM5Q8N1Q8 247 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 SLC2A14Q8TDB8 520 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 C18orf8Q96DM3 657 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 CRTAC1Q9NQ79 661 aa27.33■■□□□ 1.97
TNFRSF25-204ENST00000356876 CAPN15O75808 1086 aa27.32■■□□□ 1.96
TNFRSF25-204ENST00000356876 ADORA2BP29275 332 aa27.32■■□□□ 1.96
TNFRSF25-204ENST00000356876 GABRB2P47870 512 aa27.32■■□□□ 1.96
TNFRSF25-204ENST00000356876 DEFB103AP81534 67 aa27.32■■□□□ 1.96
TNFRSF25-204ENST00000356876 MAMLD1Q13495 774 aa27.32■■□□□ 1.96
TNFRSF25-204ENST00000356876 MEI1Q5TIA1 1274 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms