RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 C10orf53Q8N6V4 93 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 PDLIM2Q96JY6 352 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 IRX2Q9BZI1 471 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 MKL2Q9ULH7 1088 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 A0A1W2PQJ5 194 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RGS5O15539 181 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 AKR1B1P15121 316 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 PTGER2P43116 358 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 C16orf72Q14CZ0 275 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 TERB1Q8NA31 727 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 IL1RAPL1Q9NZN1 696 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 TRIM10Q9UDY6 481 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 VPS9D1Q9Y2B5 631 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 TK2O00142 265 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 PSMD14O00487 310 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 MYBP10242 640 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RRM2P31350 389 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 FMR1Q06787 632 aaKnown RBP eCLIP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 SKIV2LQ15477 1246 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF677Q86XU0 584 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 CENPLQ8N0S6 344 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 SRBD1Q8N5C6 995 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 SNRNP27Q8WVK2 155 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 THUMPD3Q9BV44 507 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 SLC38A7Q9NVC3 462 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RHOBTB3O94955 611 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RARBP10826 455 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 NPEPPSP55786 919 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 EMC2Q15006 297 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 USP38Q8NB14 1042 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF512Q96ME7 567 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 DNAJC7Q99615 494 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 ERP44Q9BS26 406 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 KATNAL1Q9BW62 490 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 METTL5Q9NRN9 209 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 COL15A1P39059 1388 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 GYS1P13807 737 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 ANXA11P50995 505 aaKnown RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 ADRM1Q16186 407 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF669Q96BR6 464 aaPredicted RBP15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RNPEPQ9H4A4 650 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 RMND5AQ9H871 391 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 SMARCAL1Q9NZC9 954 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 GUCY1A2P33402 732 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 FAM71DQ8N9W8 422 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 GLMNQ92990 594 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 DEPDC7Q96QD5 511 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 RHBDL2Q9NX52 303 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 TARSP26639 723 aaKnown RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 COILP38432 576 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 NR1I3Q14994 352 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 EFHC1Q5JVL4 640 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 NLRP9Q7RTR0 991 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 PHF20Q9BVI0 1012 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 KRT84Q9NSB2 600 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 TUBGCP4Q9UGJ1 667 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 CRLS1Q9UJA2 301 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 CST8O60676 142 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 CHI3L1P36222 383 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 RFC5P40937 340 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 KPNB1Q14974 876 aaKnown RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 OOSP2Q86WS3 158 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 TFB1MQ8WVM0 346 aaKnown RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 FAR2Q96K12 515 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 FRMD8Q9BZ67 464 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 PNPLA7Q6ZV29 1317 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF521Q96K83 1311 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 PDE5AO76074 875 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 FDFT1P37268 417 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 SMAD5Q99717 465 aaKnown RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 CINPQ9BW66 212 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 ILKAPQ9H0C8 392 aaPredicted RBP15.47■□□□□ 0.07
LMX1B-201ENST00000355497 NOD2Q9HC29 1040 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 TMEM8AQ9HCN3 771 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
LMX1B-201ENST00000355497 PRRG1O14668 218 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ANKRD49Q8WVL7 239 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 CELF4Q9BZC1 486 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 KCNF1Q9H3M0 494 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 NMRK1Q9NWW6 199 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 TRMT6Q9UJA5 497 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 HMGB3O15347 200 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 IGKV5-2P06315 115 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 SMTNL2Q2TAL5 461 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 TKFCQ3LXA3 575 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 USP39Q53GS9 565 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ARMCX4Q5H9R4 360 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 SUGP1Q8IWZ8 645 aaKnown RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 ST13P5Q8NFI4 369 aaPredicted RBP15.46■□□□□ 0.07
LMX1B-201ENST00000355497 FAM49BQ9NUQ9 324 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 PCDHB2Q9Y5E7 798 aa15.46■□□□□ 0.07
LMX1B-201ENST00000355497 TMEM191CA6NGB0 347 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms