RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 HDXQ7Z353 690 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 KRT12Q99456 494 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 SLC4A5Q9BY07 1137 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 RAD51CO43502 376 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 PHF2O75151 1096 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 RPL9P32969 192 aaKnown RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 DRG2P55039 364 aaKnown RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 LPIN1Q14693 890 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 ZNF394Q53GI3 561 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 TWF2Q6IBS0 349 aaKnown RBP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 EMBQ6PCB8 327 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 POLNQ7Z5Q5 900 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 EXD1Q8NHP7 514 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 RAET1EQ8TD07 263 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 TRIM7Q9C029 511 aa18.22■□□□□ 0.51
VPS13B-201ENST00000355155 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.22■□□□□ 0.51
VPS13B-201ENST00000355155 GABRDO14764 452 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 SART1O43290 800 aaKnown RBP18.21■□□□□ 0.51
VPS13B-201ENST00000355155 SASH3O75995 380 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 ITGA4P13612 1032 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 CHRNA3P32297 505 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 PDCLQ13371 301 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 CCDC26Q8TAB7 109 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 C18orf8Q96DM3 657 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 LRRC19Q9H756 370 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 AGO3Q9H9G7 860 aaKnown RBP18.21■□□□□ 0.51
VPS13B-201ENST00000355155 PARP2Q9UGN5 583 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 CHORDC1Q9UHD1 332 aaPredicted RBP18.21■□□□□ 0.51
VPS13B-201ENST00000355155 GOLGA6L10A0A0M3HER8 536 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 INHAP05111 366 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 COPS2P61201 443 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 CUL1Q13616 776 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 CPNE8Q86YQ8 564 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 ZDHHC17Q8IUH5 632 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 MREGQ8N565 214 aa18.21■□□□□ 0.51
VPS13B-201ENST00000355155 A0A0U1RQF3 1178 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 SPTLC1O15269 473 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 SEC31AO94979 1220 aaKnown RBP18.2■□□□□ 0.5
VPS13B-201ENST00000355155 GLI1P08151 1106 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 FNTAP49354 379 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 EPHB4P54760 987 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 TMEM110Q86TL2 294 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 CPXM1Q96SM3 734 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 SNX9Q9Y5X1 595 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 TMEM110-MUSTN1A8MSY1 372 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 DPYSL4O14531 572 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 ERBB2P04626 1255 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 CD19P15391 556 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 KLF1Q13351 362 aaPredicted RBP18.2■□□□□ 0.5
VPS13B-201ENST00000355155 TAZQ16635 292 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
VPS13B-201ENST00000355155 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 PRELID2Q8N945 189 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 SLC35F5Q8WV83 523 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
VPS13B-201ENST00000355155 FAM129AQ9BZQ8 928 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 HMX1Q9NP08 348 aaPredicted RBP18.2■□□□□ 0.5
VPS13B-201ENST00000355155 PADI3Q9ULW8 664 aa18.2■□□□□ 0.5
VPS13B-201ENST00000355155 HEXIM1O94992 359 aaKnown RBP18.19■□□□□ 0.5
VPS13B-201ENST00000355155 PTGIRP43119 386 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 LILRA4P59901 499 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 LLGL2Q6P1M3 1020 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 AGMOQ6ZNB7 445 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 TSPAN16Q9UKR8 245 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 EFR3BQ9Y2G0 817 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 CDK7P50613 346 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 OGDHQ02218 1023 aa18.19■□□□□ 0.5
VPS13B-201ENST00000355155 DDX56Q9NY93 547 aaKnown RBP18.19■□□□□ 0.5
VPS13B-201ENST00000355155 TDRD15B5MCY1 1934 aaKnown RBP18.18■□□□□ 0.5
VPS13B-201ENST00000355155 MYBL2P10244 700 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 THPOP40225 353 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 DNA2P51530 1060 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 SNX16P57768 344 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 RPL7AP62424 266 aaKnown RBP18.18■□□□□ 0.5
VPS13B-201ENST00000355155 FAM189BP81408 668 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 TMEM86AQ8N2M4 240 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 M0QYV0 167 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 PLA2G4AP47712 749 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 TAS2R40P59535 323 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 PAK2Q13177 524 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 GLRA4Q5JXX5 417 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 RCOR2Q8IZ40 523 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 PGBD4Q96DM1 585 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 GLT1D1Q96MS3 346 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 NR2E1Q9Y466 385 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 TANC1Q9C0D5 1861 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
VPS13B-201ENST00000355155 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 MGEA5O60502 916 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 FGFR1P11362 822 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 ECHS1P30084 290 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 CASKIN2Q8WXE0 1202 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 UROC1Q96N76 676 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 HOMER3Q9NSC5 361 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
VPS13B-201ENST00000355155 MTUS1Q9ULD2 1270 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms