RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ABLIM1O14639 778 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 NDUFB5O43674 189 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 CFHP08603 1231 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 GZMAP12544 262 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ATP6V1B1P15313 513 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 DPEP1P16444 411 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ADCY8P40145 1251 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 MTERF2Q49AM1 385 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 KAZNQ674X7 775 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 SLC39A4Q6P5W5 647 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 SCUBE1Q8IWY4 988 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 NR1H4Q96RI1 486 aaPredicted RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 NPHS2Q9NP85 383 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ZFP69BQ9UJL9 534 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 EXOC7Q9UPT5 735 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 CHKBQ9Y259 395 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 R3HDM2Q9Y2K5 976 aaKnown RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 PCDHA3Q9Y5H8 950 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 A0A0G2JND7 137 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 WNT10BO00744 389 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 GYG2O15488 501 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 NUDT17P0C025 328 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 HSPA6P17066 643 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 CCNG1P51959 295 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ALCAMQ13740 583 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 MPP2Q14168 576 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ACSBG2Q5FVE4 666 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 PCNX4Q63HM2 1172 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 DEFB132Q7Z7B7 95 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 MCF2L2Q86YR7 1114 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 CD101Q93033 1021 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 FAM136AQ96C01 138 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ATG4CQ96DT6 458 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 HSPBAP1Q96EW2 488 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 FAM161BQ96MY7 647 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 PDCD2LQ9BRP1 358 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 TMEM8AQ9HCN3 771 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 TBC1D22BQ9NU19 505 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 SPATA7Q9P0W8 599 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ZNRF3Q9ULT6 936 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ATP8B3O60423 1300 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 FER1L6Q2WGJ9 1857 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 A0A0J9YVX5 310 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 PI4K2BG5E9Z4 385 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 MAPK13O15264 365 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 P4HA2O15460 535 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ZNF862O60290 1169 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 DKC1O60832 514 aaKnown RBP eCLIP9.85□□□□□ -0.833e-6■■■■■ 27.9
SMG6-202ENST00000354901 CD58P19256 250 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 MYBPC2Q14324 1141 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 CYP4F22Q6NT55 531 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 DUS1LQ6P1R4 473 aaKnown RBP9.85□□□□□ -0.83
SMG6-202ENST00000354901 NIM1KQ8IY84 436 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 TAB3Q8N5C8 712 aaPredicted RBP9.85□□□□□ -0.83
SMG6-202ENST00000354901 C17orf50Q8WW18 174 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 PGM2Q96G03 612 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 C9orf72Q96LT7 481 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 FNBP1Q96RU3 617 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 GMLQ99445 158 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 TIPINQ9BVW5 301 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 C1orf112Q9NSG2 853 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 ANKFY1Q9P2R3 1169 aa9.85□□□□□ -0.83
SMG6-202ENST00000354901 WFS1O76024 890 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 WNT7BP56706 349 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 SIX1Q15475 284 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 ACAD10Q6JQN1 1059 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 CGB2Q6NT52 195 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 LRRC8BQ6P9F7 803 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 C16orf87Q6PH81 154 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 C14orf80Q86SX3 495 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 MTDHQ86UE4 582 aaKnown RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 C4orf19Q8IY42 314 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 ZBTB45Q96K62 511 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 ANKRD27Q96NW4 1050 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 RPAP3Q9H6T3 665 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 PARP2Q9UGN5 583 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 LTBP3Q9NS15 1303 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 THAP12O43422 761 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 STAMBPO95630 424 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 CYP1A2P05177 515 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 RALAP11233 206 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 RARGP13631 454 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 ITGA8P53708 1063 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 POLGP54098 1239 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 NCKAP1LP55160 1127 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 CYP24A1Q07973 514 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 GSTA5Q7RTV2 222 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 TMEM143Q96AN5 459 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 ACSF2Q96CM8 615 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 TSPAN18Q96SJ8 248 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 ZNF184Q99676 751 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 LRMDAQ9H2I8 198 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 RNF146Q9NTX7 359 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 FAF1Q9UNN5 650 aaPredicted RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 FOXN2P32314 431 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 NSFP46459 744 aaKnown RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 LIG4P49917 911 aa9.84□□□□□ -0.83
SMG6-202ENST00000354901 DRG2P55039 364 aaKnown RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 HADHBP55084 474 aaKnown RBP9.84□□□□□ -0.83
SMG6-202ENST00000354901 PLOD1Q02809 727 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms