RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 USP13Q92995 863 aaPredicted RBP17.09■□□□□ 0.33
PDGFA-201ENST00000354513 ACCSQ96QU6 501 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 FAM83CQ9BQN1 747 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
PDGFA-201ENST00000354513 DPYSL4O14531 572 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 GARTP22102 1010 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 ACAT1P24752 427 aaKnown RBP17.08■□□□□ 0.32
PDGFA-201ENST00000354513 ATXN1P54253 815 aaKnown RBP17.08■□□□□ 0.32
PDGFA-201ENST00000354513 NRLP54845 237 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 TFAMQ00059 246 aaKnown RBP17.08■□□□□ 0.32
PDGFA-201ENST00000354513 SMARCB1Q12824 385 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 DGKKQ5KSL6 1271 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 C1orf228Q6PIY5 440 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 SV2BQ7L1I2 683 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 CMTM8Q8IZV2 173 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 PI4K2AQ9BTU6 479 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.32
PDGFA-201ENST00000354513 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 PCDHB5Q9Y5E4 795 aa17.08■□□□□ 0.32
PDGFA-201ENST00000354513 PRPF6O94906 941 aaKnown RBP17.07■□□□□ 0.32
PDGFA-201ENST00000354513 HOXD13P35453 343 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 SPEM2Q0P670 501 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
PDGFA-201ENST00000354513 TXNDC8Q6A555 127 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 LAIR1Q6GTX8 287 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 FSTL4Q6MZW2 842 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
PDGFA-201ENST00000354513 GPR161Q8N6U8 529 aaKnown RBP17.07■□□□□ 0.32
PDGFA-201ENST00000354513 CELF5Q8N6W0 485 aaKnown RBP17.07■□□□□ 0.32
PDGFA-201ENST00000354513 LRRC52Q8N7C0 313 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 MAB21L3Q8N8X9 362 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 PCIF1Q9H4Z3 704 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 GKN1Q9NS71 199 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 GDAP2Q9NXN4 497 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 DDX43Q9NXZ2 648 aaKnown RBP17.07■□□□□ 0.32
PDGFA-201ENST00000354513 USP18Q9UMW8 372 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 EXOC7Q9UPT5 735 aa17.07■□□□□ 0.32
PDGFA-201ENST00000354513 NCOR2Q9Y618 2525 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 NOL4O94818 638 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 IDEP14735 1019 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 ARSAP15289 507 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 PDCP20941 246 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 CYP2F1P24903 491 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 PNPLA4P41247 253 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 LMNB2Q03252 620 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 BFSP1Q12934 665 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 SLC39A14Q15043 492 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 DDR2Q16832 855 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 LMBRD2Q68DH5 695 aaPredicted RBP17.06■□□□□ 0.32
PDGFA-201ENST00000354513 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
PDGFA-201ENST00000354513 LIMS2Q7Z4I7 341 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 GCNAQ96QF7 691 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 SLC22A12Q96S37 553 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 ACBD6Q9BR61 282 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
PDGFA-201ENST00000354513 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.06■□□□□ 0.32
PDGFA-201ENST00000354513 GABRDO14764 452 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 EXTL3O43909 919 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
PDGFA-201ENST00000354513 STAT6P42226 847 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 TSPY1Q01534 308 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 E2F4Q16254 413 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 TMEM196Q5HYL7 178 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 HEATR6Q6AI08 1181 aaKnown RBP17.05■□□□□ 0.32
PDGFA-201ENST00000354513 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 PRR23BQ6ZRT6 265 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 LONP2Q86WA8 852 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 OR5B17Q8NGF7 314 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 EZH1Q92800 747 aaPredicted RBP17.05■□□□□ 0.32
PDGFA-201ENST00000354513 EBF3Q9H4W6 596 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 FBRSL1Q9HCM7 1045 aaKnown RBP17.05■□□□□ 0.32
PDGFA-201ENST00000354513 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 GTF3C4Q9UKN8 822 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 NME7Q9Y5B8 376 aa17.05■□□□□ 0.32
PDGFA-201ENST00000354513 TNRC6BQ9UPQ9 1833 aaKnown RBP17.05■□□□□ 0.32
PDGFA-201ENST00000354513 LDHAP00338 332 aaKnown RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 DDX6P26196 483 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 HOXA6P31267 233 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 TXLNAP40222 546 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 NASPP49321 788 aaPredicted RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 USP4Q13107 963 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 ALCAMQ13740 583 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 RUNX3Q13761 415 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 SIM2Q14190 667 aaPredicted RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 MON1AQ86VX9 555 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 WDR5BQ86VZ2 330 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 ADGRF2Q8IZF7 708 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms