RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLMAPQ14BN4 828 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 LRRC14Q15048 493 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 LONRF1Q17RB8 773 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 ZNF568Q3ZCX4 644 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 SEL1L2Q5TEA6 688 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 MFSD14CQ5VZR4 134 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 KRT39Q6A163 491 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 CCDC25Q86WR0 208 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 SLC13A5Q86YT5 568 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 ZBTB8OSQ8IWT0 167 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 HELQQ8TDG4 1101 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 ZNF296Q8WUU4 475 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 DHX38Q92620 1227 aaKnown RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 N4BP2L2Q92802 583 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 DDX23Q9BUQ8 820 aaKnown RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 NOD2Q9HC29 1040 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 TMEM8AQ9HCN3 771 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 GGT7Q9UJ14 662 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 AGAP1Q9UPQ3 857 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 UMODL1Q5DID0 1318 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 SCN1AP35498 2009 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 SNX3O60493 162 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 TSPAN1O60635 241 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 RTN2O75298 545 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 CHRNB2P17787 502 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 SLC8A1P32418 973 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 POU5F1BQ06416 359 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 TFDP1Q14186 410 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 ZACNQ401N2 412 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 GDF6Q6KF10 455 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 MFSD5Q6N075 450 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 TBC1D1Q86TI0 1168 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 NOP9Q86U38 636 aaKnown RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 EXOC8Q8IYI6 725 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 TBC1D31Q96DN5 1066 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 UPF3AQ9H1J1 476 aaKnown RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 APOBEC3GQ9HC16 384 aaKnown RBP9.11□□□□□ -0.95
TRIM55-204ENST00000353317 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 BAIAP2L1Q9UHR4 511 aa9.11□□□□□ -0.95
TRIM55-204ENST00000353317 PMM2O15305 246 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 CLTAP09496 248 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 CXCL8P10145 99 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 EZRP15311 586 aaKnown RBP9.1□□□□□ -0.95
TRIM55-204ENST00000353317 TNNI1P19237 187 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 KCNA10Q16322 511 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 FAM187BQ17R55 369 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 MPZL3Q6UWV2 235 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 TAOK1Q7L7X3 1001 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 CROCCP2Q86T23 111 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 SLC47A2Q86VL8 602 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 FAM212AQ96EL1 285 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 C2orf40Q9H1Z8 148 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 CDC42EP4Q9H3Q1 356 aaKnown RBP9.1□□□□□ -0.95
TRIM55-204ENST00000353317 RAB20Q9NX57 234 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 NOCTQ9UK39 431 aaKnown RBP9.1□□□□□ -0.95
TRIM55-204ENST00000353317 TNFSF13BQ9Y275 285 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 RRN3P2A6NIE6 340 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 FOXO6A8MYZ6 492 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 OGTO15294 1046 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 SPOPO43791 374 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 MTA2O94776 668 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 ACSL3O95573 720 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 OAS1P00973 400 aaKnown RBP9.1□□□□□ -0.95
TRIM55-204ENST00000353317 ASGR1P07306 291 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 PHKA2P46019 1235 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 PDE6CP51160 858 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 BRSK2Q8IWQ3 736 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 FBXL13Q8NEE6 735 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 KLHDC9Q8NEP7 349 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 ZNF564Q8TBZ8 553 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-204ENST00000353317 MGARPQ8TDB4 240 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 NUP85Q9BW27 656 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 STMN4Q9H169 189 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-204ENST00000353317 XPNPEP3Q9NQH7 507 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 MTUS1Q9ULD2 1270 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 HES2Q9Y543 173 aa9.1□□□□□ -0.95
TRIM55-204ENST00000353317 FRMPD3Q5JV73 1810 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 A0A1B0GUA9 196 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 SMIM35A0A1B0GVV1 85 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 P4HA2O15460 535 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 CYP26A1O43174 497 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 UBOX5O94941 541 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 HLA-DRAP01903 254 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 GZMAP12544 262 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 CETN1Q12798 172 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 ACCSLQ4AC99 568 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 FAM71AQ8IYT1 594 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 ARHGEF2Q92974 986 aaKnown RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 RUNDC3BQ96NL0 473 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 EIF2AQ9BY44 585 aaKnown RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 ROPN1BQ9BZX4 212 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms