RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 SGK1O00141 431 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 MAGEB2O15479 319 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 NEDD9Q14511 834 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 RASA2Q15283 850 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 PCGF5Q86SE9 256 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 RPAINQ86UA6 219 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 ZBED8Q8IZ13 594 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 DENND1AQ8TEH3 1009 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 TFAP2BQ92481 460 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 PAIP2Q9BPZ3 127 aaKnown RBP23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 TMEM121Q9BTD3 319 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 CPSF3Q9UKF6 684 aaKnown RBP23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 EFR3BQ9Y2G0 817 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 SPAG7O75391 227 aa23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 CCDC15Q0P6D6 951 aa23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 CYP4A22Q5TCH4 519 aa23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 CDCA2Q69YH5 1023 aaPredicted RBP23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 PRCCQ92733 491 aaPredicted RBP23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 KLHL29Q96CT2 875 aa23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 RMDN2Q96LZ7 410 aa23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 SLC24A2Q9UI40 661 aa23.15■■□□□ 1.3
NKX2-4-201ENST00000351817 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 PRKCBP05771 671 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 WEE2P0C1S8 567 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 KRT15P19012 456 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 POLR2BP30876 1174 aaKnown RBP23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 YWHAEP62258 255 aaKnown RBP23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 KCNJ2P63252 427 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 SPARCL1Q14515 664 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 PKN2Q16513 984 aaKnown RBP23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 ZNF699Q32M78 642 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 ZBTB8OSQ8IWT0 167 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 FAM167AQ96KS9 214 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 SMC6Q96SB8 1091 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 FRMD8P1Q9BZ68 369 aaPredicted RBP23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 STARD13Q9Y3M8 1113 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 SNCAIPQ9Y6H5 919 aa23.14■■□□□ 1.3
NKX2-4-201ENST00000351817 IFNB1P01574 187 aa23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 TCF7P36402 384 aaPredicted RBP23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 PDIA2Q13087 525 aaKnown RBP23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 HP1BP3Q5SSJ5 553 aaPredicted RBP23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 RGS9BPQ6ZS82 235 aa23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 SEPT1Q8WYJ6 367 aa23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 PNMA3Q9UL41 463 aa23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 AGTPBP1Q9UPW5 1226 aa23.14■■□□□ 1.29
NKX2-4-201ENST00000351817 A0A1B0GUA9 196 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 C3orf70A6NLC5 250 aaPredicted RBP23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 PSMA2P25787 234 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 TFAMQ00059 246 aaKnown RBP23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 MGAT5Q09328 741 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 MAPK6Q16659 721 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 SH3D19Q5HYK7 790 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 SCARA5Q6ZMJ2 495 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 TTC13Q8NBP0 860 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 PHACTR1Q9C0D0 580 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 SIGLEC16A6NMB1 481 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 ABLIM1O14639 778 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 DDNO94850 711 aaPredicted RBP23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 KRT7P08729 469 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 SRGAP2CP0DJJ0 459 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 ASPAP45381 313 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 LAMTOR4Q0VGL1 99 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 VGLL4Q14135 290 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 MXD4Q14582 209 aaPredicted RBP23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 FAM47EQ6ZV65 393 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 ECHDC2Q86YB7 292 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 ARHGEF3Q9NR81 526 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 PSMC3IPQ9P2W1 217 aaPredicted RBP23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 MCM8Q9UJA3 840 aa23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 FARP1Q9Y4F1 1045 aaPredicted RBP23.13■■□□□ 1.29
NKX2-4-201ENST00000351817 GAS2O43903 313 aaKnown RBP23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 HOXC6P09630 235 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 EDNRBP24530 442 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 SKIV2L2P42285 1042 aaKnown RBP23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 LACTBP83111 547 aaPredicted RBP23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 E2F5Q15329 346 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 HIF1AQ16665 826 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 HADHQ16836 314 aaKnown RBP23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 DENND1BQ6P3S1 775 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 XYLT2Q9H1B5 865 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 LHX5Q9H2C1 402 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 PTPRFP10586 1907 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 GOLGA8SH3BPF8 625 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 TNNC2P02585 160 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 TGFB3P10600 412 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 KRT3P12035 628 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 RFC1P35251 1148 aaPredicted RBP23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 SLC25A11Q02978 314 aaKnown RBP23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 PTPN20Q4JDL3 420 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 METTL7BQ6UX53 244 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 CAPN12Q6ZSI9 719 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 ASRGL1Q7L266 308 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 PPIL6Q8IXY8 311 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 RNF149Q8NC42 400 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 FNIP1Q8TF40 1166 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 C2orf40Q9H1Z8 148 aa23.12■■□□□ 1.29
NKX2-4-201ENST00000351817 MED7O43513 233 aa23.11■■□□□ 1.29
NKX2-4-201ENST00000351817 ALADP13716 330 aa23.11■■□□□ 1.29
NKX2-4-201ENST00000351817 CCNB1P14635 433 aa23.11■■□□□ 1.29
NKX2-4-201ENST00000351817 OTUD4Q01804 1114 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms